G2086563


Basic Information

Item Value
gene id G2086563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45256959 ~ 45257479 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386337
ATTAAAAACGATGAGGAGTTTTGGTTAAGATCAAATCGATCAAAGAGGATTTCAGAGGATATTTTATATTCAACCTCGTTACACTGTAGACAATCTGAGTGGGATTATAGGTCTGCAGATAGTACATAGTACGGGTTGGGTCTCTTTACATGTAGATTATAGGTCTGTAGTTAGTACGGGTTGGGTCTCTTTACATGTAGATTATAGGTCTGCAGATAGTACGGGTTGGGTCTCTTTACATGTAGATTATAGGTCTGTAGTTAGTACGGGTTGGGTCTCTTTACATGTAGATTATAGGTCTGTAGTTAGTACGGGTTGGGTCTCTTTATATGTAGATTATAGGTCTGTAGTTAGTACGGGTTGGGTCTCTTTACATGTAGATTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386337 True 386 lncRNA 0.38 2 45256959 45257479

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 1024136 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 1155068 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 1158923 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 1166744 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 1358400 43896547 ~ 43898559 (+)
usp16 usp16 coding downstream 186426 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 222849 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 235744 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 445686 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 519540 45776962 ~ 45777979 (+)
G2086555 NA non-coding upstream 24383 45231987 ~ 45232576 (+)
G2086545 NA non-coding upstream 52008 45204647 ~ 45204951 (+)
G2086532 NA non-coding upstream 86128 45168357 ~ 45170831 (+)
G2086526 NA non-coding upstream 110267 45143922 ~ 45146692 (+)
G2086509 NA non-coding upstream 147057 45109551 ~ 45109902 (+)
G2086566 NA non-coding downstream 4277 45261756 ~ 45262232 (+)
G2086573 NA non-coding downstream 21154 45278633 ~ 45279057 (+)
cadm2b LOC106581539 non-coding downstream 101733 44867987 ~ 45361689 (+)
G2086600 LOC106572279 non-coding downstream 106990 45364469 ~ 45364749 (+)
G2086604 NA non-coding downstream 122135 45379614 ~ 45380539 (+)
G2085969 NA other upstream 846909 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1137720 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1523065 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1724381 43532270 ~ 43532578 (+)
G2084659 NA other upstream 2192702 43063288 ~ 43064257 (+)
G2087149 NA other downstream 539620 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1065605 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1236443 46493922 ~ 46499497 (+)

Expression


Co-expression Network