G2086630


Basic Information

Item Value
gene id G2086630
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45421933 ~ 45422531 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386414
ctggcactggtggtactgggccgaggacacgcacaggaagcctggtgcggggagctgctaccggagggctggggtgtggaggtggcacaggatgggttagaccgtgaaggcgtactggagatcttgagagcggtgctggcacaggacgtgcaaggctagggaggtgcacaggaggcctggtacgtgagactggcaccatcttcaccagccgactaacacgcacctcaggacgagtatggagcgctgacccaggtgccatccatgtttaaaacaccaacacagcaactccctcatttctctctcctccaatttccccattaactccttcacagtctctgtttcgctcacctccaacaccggctctggttctggtctcctccttggctcctcacgataaacagggagagttggctcaggtctggctcctgactctgccacactctccctgagccccccccccaagaaatttttggggctgactatggggcctccgtccgcgccgccttgcttgcttcgcaaactccattctcctatatccttccgcgcactgctccatcgaatcccaggcgggctccggcactctccctgggtcgaccgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386414 True 599 lncRNA 0.60 1 45421933 45422531

Neighbor

gene id symbol gene type direction distance location
cadm2b LOC106581539 coding upstream 61278 44867987 ~ 45361689 (+)
LOC110508097 LOC105006673 coding upstream 1189110 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 1320042 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 1323897 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 1331718 44088591 ~ 44090215 (+)
usp16 usp16 coding downstream 21374 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 57797 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 70692 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 280634 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 354488 45776962 ~ 45777979 (+)
G2086604 NA non-coding upstream 41394 45379614 ~ 45380539 (+)
G2086600 LOC106572279 non-coding upstream 57184 45364469 ~ 45364749 (+)
G2086573 NA non-coding upstream 142876 45278633 ~ 45279057 (+)
G2086566 NA non-coding upstream 159701 45261756 ~ 45262232 (+)
G2086634 NA non-coding downstream 7518 45430049 ~ 45430323 (+)
G2086643 NA non-coding downstream 18231 45440762 ~ 45441212 (+)
G2086644 NA non-coding downstream 20335 45442866 ~ 45443086 (+)
G2086658 NA non-coding downstream 51337 45473868 ~ 45475843 (+)
G2085969 NA other upstream 1011883 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1302694 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1688039 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1889355 43532270 ~ 43532578 (+)
G2084659 NA other upstream 2357676 43063288 ~ 43064257 (+)
G2087149 NA other downstream 374568 45797099 ~ 45798593 (+)
G2087569 NA other downstream 900553 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1071391 46493922 ~ 46499497 (+)

Expression


Co-expression Network