G2086644


Basic Information

Item Value
gene id G2086644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45442866 ~ 45443086 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386428
ATTTAGTGCATAACGTTGTACATAACATGGATACTTACAAACAGTATCAAAAAGTACCGTAACAATATAAGAATATCAAAACTCCTAAAAAAAAGTGCTGTTCTGCAGAACCTGACCAGTATTATTGGCCTATATTCAAGATTAACATGCCTCTGACAATCTCcaaaaacaatacaaacaattctataaataaaaatatatacatatatatacatatgccA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386428 True 221 lncRNA 0.29 1 45442866 45443086

Neighbor

gene id symbol gene type direction distance location
cadm2b LOC106581539 coding upstream 82211 44867987 ~ 45361689 (+)
LOC110508097 LOC105006673 coding upstream 1210043 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 1340975 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 1344830 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 1352651 44088591 ~ 44090215 (+)
usp16 usp16 coding downstream 819 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 37242 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 50137 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 260079 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 333933 45776962 ~ 45777979 (+)
G2086643 NA non-coding upstream 1654 45440762 ~ 45441212 (+)
G2086634 NA non-coding upstream 12543 45430049 ~ 45430323 (+)
G2086630 NA non-coding upstream 20335 45421933 ~ 45422531 (+)
G2086604 NA non-coding upstream 62327 45379614 ~ 45380539 (+)
G2086600 LOC106572279 non-coding upstream 78117 45364469 ~ 45364749 (+)
G2086658 NA non-coding downstream 30782 45473868 ~ 45475843 (+)
G2086668 NA non-coding downstream 52509 45495595 ~ 45497342 (+)
G2086678 NA non-coding downstream 71145 45514231 ~ 45514541 (+)
G2086688 NA non-coding downstream 89675 45532761 ~ 45532987 (+)
G2085969 NA other upstream 1032816 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1323627 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1708972 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1910288 43532270 ~ 43532578 (+)
G2084659 NA other upstream 2378609 43063288 ~ 43064257 (+)
G2087149 NA other downstream 354013 45797099 ~ 45798593 (+)
G2087569 NA other downstream 879998 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1050836 46493922 ~ 46499497 (+)

Expression


Co-expression Network