G2086658


Basic Information

Item Value
gene id G2086658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45473868 ~ 45475843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386457
atagaatgatggagaacagtagctacacatcagttagagtgctgtctgctgatagaatgatggagaacagtagctccacatcagtctgtctgctgatagaatgatggagaacagtagctccacatcagtcagagtgctgtctgctgatagaatatTGTTGAATTCTCAAGAGTTCAGAAGTGAAACTGAAGCACAAAATGAGTCTGACGCtgagcagaaattacaataagaacCATTTTAGATCTGCGTTTACAAAACGCAGCAAAATATTTCTTATGCgttatacatattttattttttccccAACTGTCTTTATTGCGACAAATGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386457 True 330 lncRNA 0.38 2 45473868 45475843

Neighbor

gene id symbol gene type direction distance location
cadm2b LOC106581539 coding upstream 113213 44867987 ~ 45361689 (+)
LOC110508097 LOC105006673 coding upstream 1241045 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 1371977 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 1375832 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 1383653 44088591 ~ 44090215 (+)
LOC110508103 LOC106581548 coding downstream 4485 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 17380 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 227322 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 301176 45776962 ~ 45777979 (+)
LOC110508109 LOC105029023 coding downstream 727754 46203597 ~ 46349567 (+)
G2086644 NA non-coding upstream 30782 45442866 ~ 45443086 (+)
G2086643 NA non-coding upstream 32656 45440762 ~ 45441212 (+)
G2086634 NA non-coding upstream 43545 45430049 ~ 45430323 (+)
G2086630 NA non-coding upstream 51337 45421933 ~ 45422531 (+)
G2086604 NA non-coding upstream 93329 45379614 ~ 45380539 (+)
G2086668 NA non-coding downstream 19752 45495595 ~ 45497342 (+)
G2086678 NA non-coding downstream 38388 45514231 ~ 45514541 (+)
G2086688 NA non-coding downstream 56918 45532761 ~ 45532987 (+)
G2086691 NA non-coding downstream 62067 45537910 ~ 45538203 (+)
G2085969 NA other upstream 1063818 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1354629 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1739974 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1941290 43532270 ~ 43532578 (+)
G2084659 NA other upstream 2409611 43063288 ~ 43064257 (+)
G2087149 NA other downstream 321256 45797099 ~ 45798593 (+)
G2087569 NA other downstream 847241 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1018079 46493922 ~ 46499497 (+)

Expression


Co-expression Network