G2086678


Basic Information

Item Value
gene id G2086678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45514231 ~ 45514541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386478
GTCTGGATGTTCTCCCATATCCTCCACAGTCACACTAACAGGCTCCTCCTCCACAGTCACACTGACAGGCTCGTCCTCCACAGTCACACTAACAGGCCCCTCCTTCACACTGACAGGCTCCTCCTTCACACTGACATGCTCCTCCTCCGCAGTCACACTAACAGGCTCCTCCACACTAACAGGCTCCTCCTCCACAGTCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386478 True 203 lncRNA 0.56 2 45514231 45514541

Neighbor

gene id symbol gene type direction distance location
LOC110508103 LOC106581548 coding upstream 26522 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 35165 45443905 ~ 45479066 (+)
cadm2b LOC106581539 coding upstream 153576 44867987 ~ 45361689 (+)
LOC110508097 LOC105006673 coding upstream 1281408 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 1412340 44100049 ~ 44101891 (+)
foxo1a LOC106581554 coding downstream 188624 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 262478 45776962 ~ 45777979 (+)
LOC110508109 LOC105029023 coding downstream 689056 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 837454 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 860778 46375319 ~ 46411167 (+)
G2086668 NA non-coding upstream 16889 45495595 ~ 45497342 (+)
G2086658 NA non-coding upstream 38388 45473868 ~ 45475843 (+)
G2086644 NA non-coding upstream 71145 45442866 ~ 45443086 (+)
G2086643 NA non-coding upstream 73019 45440762 ~ 45441212 (+)
G2086634 NA non-coding upstream 83908 45430049 ~ 45430323 (+)
G2086688 NA non-coding downstream 18220 45532761 ~ 45532987 (+)
G2086691 NA non-coding downstream 23369 45537910 ~ 45538203 (+)
G2086694 NA non-coding downstream 27876 45542417 ~ 45542652 (+)
G2086695 NA non-coding downstream 28445 45542986 ~ 45543379 (+)
G2086700 LOC106589469 non-coding downstream 78655 45593196 ~ 45593500 (+)
G2085969 NA other upstream 1104181 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1394992 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1780337 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1981653 43532270 ~ 43532578 (+)
mtus2b LOC106593344 other downstream 14915 45493223 ~ 45664305 (+)
G2087149 NA other downstream 282558 45797099 ~ 45798593 (+)
G2087569 NA other downstream 808543 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 979381 46493922 ~ 46499497 (+)
G2087865 NA other downstream 1512578 47027119 ~ 47028563 (+)

Expression


Co-expression Network