Gene
RNA
| Item | Value |
|---|---|
| gene id | G2086688 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 45532761 ~ 45532987 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2386488 | True | 227 | lncRNA | 0.37 | 1 | 45532761 | 45532987 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508103 | LOC106581548 | coding | upstream | 45052 | 45480328 ~ 45487737 (+) |
| usp16 | usp16 | coding | upstream | 53695 | 45443905 ~ 45479066 (+) |
| cadm2b | LOC106581539 | coding | upstream | 172106 | 44867987 ~ 45361689 (+) |
| LOC110508097 | LOC105006673 | coding | upstream | 1299938 | 44111550 ~ 44232823 (+) |
| LOC110507242 | NA | coding | upstream | 1430870 | 44100049 ~ 44101891 (+) |
| foxo1a | LOC106581554 | coding | downstream | 170178 | 45703165 ~ 45791795 (+) |
| LOC118944695 | NA | coding | downstream | 244032 | 45776962 ~ 45777979 (+) |
| LOC110508109 | LOC105029023 | coding | downstream | 670610 | 46203597 ~ 46349567 (+) |
| LOC118944693 | NA | coding | downstream | 819008 | 46351995 ~ 46354652 (+) |
| nek3 | nek3 | coding | downstream | 842332 | 46375319 ~ 46411167 (+) |
| mtus2b | LOC106593344 | non-coding | upstream | 4445 | 45493223 ~ 45664305 (+) |
| G2086678 | NA | non-coding | upstream | 18220 | 45514231 ~ 45514541 (+) |
| G2086668 | NA | non-coding | upstream | 35419 | 45495595 ~ 45497342 (+) |
| G2086658 | NA | non-coding | upstream | 56918 | 45473868 ~ 45475843 (+) |
| G2086644 | NA | non-coding | upstream | 89675 | 45442866 ~ 45443086 (+) |
| G2086691 | NA | non-coding | downstream | 4923 | 45537910 ~ 45538203 (+) |
| G2086694 | NA | non-coding | downstream | 9430 | 45542417 ~ 45542652 (+) |
| G2086695 | NA | non-coding | downstream | 9999 | 45542986 ~ 45543379 (+) |
| G2086700 | LOC106589469 | non-coding | downstream | 60209 | 45593196 ~ 45593500 (+) |
| G2086701 | NA | non-coding | downstream | 66189 | 45599176 ~ 45599513 (+) |
| G2085969 | NA | other | upstream | 1122711 | 44408053 ~ 44410050 (+) |
| G2085314 | NA | other | upstream | 1413522 | 44118223 ~ 44119239 (+) |
| G2085122 | NA | other | upstream | 1798867 | 43732395 ~ 43733894 (+) |
| G2087149 | NA | other | downstream | 264112 | 45797099 ~ 45798593 (+) |
| G2087569 | NA | other | downstream | 790097 | 46323084 ~ 46323694 (+) |
| G2087592 | LOC106592078 | other | downstream | 960935 | 46493922 ~ 46499497 (+) |
| G2087865 | NA | other | downstream | 1494132 | 47027119 ~ 47028563 (+) |
| prcp | prcp | other | downstream | 1504055 | 47020501 ~ 47056921 (+) |
