G2086700 (LOC106589469)


Basic Information

Item Value
gene id G2086700
gene name LOC106589469
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45593196 ~ 45593500 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386503
GGAGGAGTCATTTTCCCTTGAAGGCCttgacaaggctgtacatctgatgtgcaaaaaggcccttcccttgtagtttggaattcagttcattcatgagggccatgatgtccacggtgaagacaaaatcagccaaccattctttatctgGCAGTTGAGGGAAATCCACAGATTTTCCTTTCAATCGCAAAAACTCTGCAATCTCAGACTTCAGGTCCCACACCTTtttaagcaccttccccaaactcagccatctcacgtttgtgtgttaggggagatctgcatgacccgactgtctcttccaacag

Function

NR:

description
General transcription factor II-I repeat domain-containing protein 2B, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386503 True 305 lncRNA 0.47 1 45593196 45593500

Neighbor

gene id symbol gene type direction distance location
LOC110508103 LOC106581548 coding upstream 105487 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 114130 45443905 ~ 45479066 (+)
cadm2b LOC106581539 coding upstream 232541 44867987 ~ 45361689 (+)
LOC110508097 LOC105006673 coding upstream 1360373 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 1491305 44100049 ~ 44101891 (+)
foxo1a LOC106581554 coding downstream 109665 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 183519 45776962 ~ 45777979 (+)
LOC110508109 LOC105029023 coding downstream 610097 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 758495 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 781819 46375319 ~ 46411167 (+)
G2086695 NA non-coding upstream 49817 45542986 ~ 45543379 (+)
G2086694 NA non-coding upstream 50544 45542417 ~ 45542652 (+)
G2086691 NA non-coding upstream 54993 45537910 ~ 45538203 (+)
G2086688 NA non-coding upstream 60209 45532761 ~ 45532987 (+)
G2086678 NA non-coding upstream 78655 45514231 ~ 45514541 (+)
G2086701 NA non-coding downstream 5676 45599176 ~ 45599513 (+)
G2086702 NA non-coding downstream 6954 45600454 ~ 45600725 (+)
G2086704 NA non-coding downstream 8372 45601872 ~ 45602081 (+)
G2086705 NA non-coding downstream 9971 45603471 ~ 45603673 (+)
G2086709 NA non-coding downstream 17351 45610851 ~ 45611779 (+)
mtus2b LOC106593344 other upstream 63257 45493223 ~ 45664305 (+)
G2085969 NA other upstream 1183146 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1473957 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1859302 43732395 ~ 43733894 (+)
G2087149 NA other downstream 203599 45797099 ~ 45798593 (+)
G2087569 NA other downstream 729584 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 900422 46493922 ~ 46499497 (+)
G2087865 NA other downstream 1433619 47027119 ~ 47028563 (+)
prcp prcp other downstream 1443542 47020501 ~ 47056921 (+)

Expression


Co-expression Network