G2086701


Basic Information

Item Value
gene id G2086701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45599176 ~ 45599513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386504
ATTGTGAAACGGTTCCATGTGTCTGTATGAAGGCTTAATGGTGTTACCTACAGTGTGTTTCAGTTACATACCGTATTCAGTGGTTGTTTACAATCAGACATTGTAATACAGGATGTGTAGCGTGTAGCATCTATGCTTGGTGGACCGTAATGGTCTAATCGCCCAGATACCTCTGCTAGGTTAgcactgagttacagtaatatcCCCCAGATACCTCTGCTAGGTTAgcactgagttacagtaatatcCCCCAGATACCTCTGCTAGGTTAGCACTGAGTTACTGTAATATCCCCCCAGATACCTCTGCTAGGTTAGCACTGAGTTACTGTAATATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386504 True 338 lncRNA 0.43 1 45599176 45599513

Neighbor

gene id symbol gene type direction distance location
LOC110508103 LOC106581548 coding upstream 111467 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 120110 45443905 ~ 45479066 (+)
cadm2b LOC106581539 coding upstream 238521 44867987 ~ 45361689 (+)
LOC110508097 LOC105006673 coding upstream 1366353 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 1497285 44100049 ~ 44101891 (+)
foxo1a LOC106581554 coding downstream 103652 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 177506 45776962 ~ 45777979 (+)
LOC110508109 LOC105029023 coding downstream 604084 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 752482 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 775806 46375319 ~ 46411167 (+)
G2086700 LOC106589469 non-coding upstream 5676 45593196 ~ 45593500 (+)
G2086695 NA non-coding upstream 55797 45542986 ~ 45543379 (+)
G2086694 NA non-coding upstream 56524 45542417 ~ 45542652 (+)
G2086691 NA non-coding upstream 60973 45537910 ~ 45538203 (+)
G2086688 NA non-coding upstream 66189 45532761 ~ 45532987 (+)
G2086702 NA non-coding downstream 941 45600454 ~ 45600725 (+)
G2086704 NA non-coding downstream 2359 45601872 ~ 45602081 (+)
G2086705 NA non-coding downstream 3958 45603471 ~ 45603673 (+)
G2086709 NA non-coding downstream 11338 45610851 ~ 45611779 (+)
G2086710 NA non-coding downstream 14737 45614250 ~ 45614453 (+)
mtus2b LOC106593344 other upstream 69237 45493223 ~ 45664305 (+)
G2085969 NA other upstream 1189126 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1479937 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1865282 43732395 ~ 43733894 (+)
G2087149 NA other downstream 197586 45797099 ~ 45798593 (+)
G2087569 NA other downstream 723571 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 894409 46493922 ~ 46499497 (+)
G2087865 NA other downstream 1427606 47027119 ~ 47028563 (+)
prcp prcp other downstream 1437529 47020501 ~ 47056921 (+)

Expression


Co-expression Network