G2086718


Basic Information

Item Value
gene id G2086718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45634436 ~ 45634678 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386530
ATCCATCCTCCTTCCCTGACCCTTCctcatccatcctccctccctcacccttccTCACTCATCCTTCCTCCCTCACCCTTCCTCACtcatccttcctccctcccttaatCTTCCCCACCAATCCTCCTTCCCTCACCCTTCctcatccatcctccctcccttaaTCTTCCTCAcccacccatcctccctcccttagTCTTCCTCATCCATCCTCCTTCCCTCACCCTTCCTCATCCATCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386530 True 243 lncRNA 0.56 1 45634436 45634678

Neighbor

gene id symbol gene type direction distance location
LOC110508103 LOC106581548 coding upstream 146727 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 155370 45443905 ~ 45479066 (+)
cadm2b LOC106581539 coding upstream 273781 44867987 ~ 45361689 (+)
LOC110508097 LOC105006673 coding upstream 1401613 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 1532545 44100049 ~ 44101891 (+)
foxo1a LOC106581554 coding downstream 68487 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 142341 45776962 ~ 45777979 (+)
LOC110508109 LOC105029023 coding downstream 568919 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 717317 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 740641 46375319 ~ 46411167 (+)
G2086710 NA non-coding upstream 19983 45614250 ~ 45614453 (+)
G2086709 NA non-coding upstream 22657 45610851 ~ 45611779 (+)
G2086705 NA non-coding upstream 30763 45603471 ~ 45603673 (+)
G2086704 NA non-coding upstream 32355 45601872 ~ 45602081 (+)
G2086702 NA non-coding upstream 33711 45600454 ~ 45600725 (+)
G2086719 NA non-coding downstream 375 45635053 ~ 45635375 (+)
G2086653 NA non-coding downstream 29665 45664343 ~ 45673089 (+)
G2087136 NA non-coding downstream 41503 45676181 ~ 45677370 (+)
G2087139 NA non-coding downstream 44547 45679225 ~ 45679427 (+)
G2087141 NA non-coding downstream 49106 45683784 ~ 45684002 (+)
mtus2b LOC106593344 other upstream 104497 45493223 ~ 45664305 (+)
G2085969 NA other upstream 1224386 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1515197 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1900542 43732395 ~ 43733894 (+)
G2087149 NA other downstream 162421 45797099 ~ 45798593 (+)
G2087569 NA other downstream 688406 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 859244 46493922 ~ 46499497 (+)
G2087865 NA other downstream 1392441 47027119 ~ 47028563 (+)
prcp prcp other downstream 1402364 47020501 ~ 47056921 (+)

Expression


Co-expression Network