G2087149


Basic Information

Item Value
gene id G2087149
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45797099 ~ 45798593 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387070
accagacttcatgaggtagtcacctggaatgcatttcaattaacaggtgtgacacgttaaaagttaatttgtggaatttatttccttcttaatgcgtttgagccaatcagttgtgttgtgacaaggtaggggtggtatacagaagatagccctatttggtaaaataccaactccatattatggcaagaacagctcaaataagcaaagagaaatgacaaccatcattactttaagacattaaggtcagtcaatactgAACATTTATTCAAATGCAGTTGcagaaaccatcaagcgttatgatgaaactgtctctcatgaggaacgtcacaggaaaggaagacccagagttacctctgctgcagaggataagttcactagagtttccagcctcagaaattgcagcccaaataaatgcttcacagagatcaagtaacagacacatctcaacatcaattgttcagaggagactgtatgaatcaggccttcatggtcgaattgctgcaaagaaaacactactaaaggacaccaataagaagagacttgcttgggccaagaaacacgagcaatggacattagactggtggaaatctgtcctttggtctgatgagtccaaatttgagatttttggttccaaaccgccgtgtctttgtgagaggcagagtaggtgaacggatgatctctgcatgtgtggttcccaccgtgaagcatggaggaggacgtgtgatggtgctttgctggtgacactgtctgtgatttattatttagaattcaaagcacacttaaccagcatggctaccaaatcaaatcaaatgttattggtcacatggttagcagattttaatgggagtgtagcgaaatgcttgtgcttctagttccgacagtgcagtaataaccaaccaAGTAATCTATCAATACCACAACAACTAgcttatacacacaaatctataAACACACAAATCTATATATGGATAAGTGCAtccaccacagcattctgaagcgatacgccatcccatctggtttgcgcttagtgggactatcatttgttttttaacaggacaatgaccaaacactccaggctgtgtaagggctatttgaccaagaaaaagagtgatggagtgctgtatcagataacctggcctccataGTCACCCAACCTCAAGCCAATTGaaatgatttgggatgagttggaccacagagtgaaggaaaagcagccaacaagtgctcagcatatgtgggaactccttcaagactgttgtaaaagcattccaggtgaagctggttgagagaatgccaagagtgtgtaaagctgtcaacaaggcaaagggtggctacttcgaataatctcaaatataaaatatattcacttttctggttactacatgattccatatgtgttatttcatagaaaatagtaaaaaataaagaaaaaccctggaatgagtaggtgtgtccaaacttttgactggtactgtatatgcacacacacgcactcacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387070 True 1495 TUCP 0.41 1 45797099 45798593

Neighbor

gene id symbol gene type direction distance location
foxo1a LOC106581554 coding upstream 5304 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 19120 45776962 ~ 45777979 (+)
mtus2b LOC106593344 coding upstream 132794 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 309390 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 318033 45443905 ~ 45479066 (+)
LOC110508109 LOC105029023 coding downstream 405004 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 553402 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 576726 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 774628 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 781027 46579620 ~ 46761993 (+)
G2087154 NA non-coding upstream 75831 45720880 ~ 45721268 (+)
G2087145 LOC106581545 non-coding upstream 97371 45688027 ~ 45699728 (+)
G2087144 NA non-coding upstream 109307 45687447 ~ 45687792 (+)
G2087141 NA non-coding upstream 113097 45683784 ~ 45684002 (+)
G2087147 NA non-coding downstream 525 45799118 ~ 45801587 (+)
G2087333 NA non-coding downstream 82735 45881328 ~ 45881554 (+)
G2087346 NA non-coding downstream 99953 45898546 ~ 45898783 (+)
G2087350 NA non-coding downstream 112968 45911561 ~ 45911816 (+)
G2087389 NA non-coding downstream 162964 45961557 ~ 45961796 (+)
G2085969 NA other upstream 1387049 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1677860 44118223 ~ 44119239 (+)
G2085122 NA other upstream 2063205 43732395 ~ 43733894 (+)
G2087569 NA other downstream 524491 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 695329 46493922 ~ 46499497 (+)
G2087865 NA other downstream 1228526 47027119 ~ 47028563 (+)
prcp prcp other downstream 1238449 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1726847 47525440 ~ 47528548 (+)

Expression


Co-expression Network