Gene
RNA
| Item | Value |
|---|---|
| gene id | G2087346 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 45898546 ~ 45898783 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2387293 | True | 238 | lncRNA | 0.30 | 1 | 45898546 | 45898783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| foxo1a | LOC106581554 | coding | upstream | 106751 | 45703165 ~ 45791795 (+) |
| LOC118944695 | NA | coding | upstream | 120567 | 45776962 ~ 45777979 (+) |
| mtus2b | LOC106593344 | coding | upstream | 234241 | 45493223 ~ 45664305 (+) |
| LOC110508103 | LOC106581548 | coding | upstream | 410837 | 45480328 ~ 45487737 (+) |
| usp16 | usp16 | coding | upstream | 419480 | 45443905 ~ 45479066 (+) |
| LOC110508109 | LOC105029023 | coding | downstream | 304814 | 46203597 ~ 46349567 (+) |
| LOC118944693 | NA | coding | downstream | 453212 | 46351995 ~ 46354652 (+) |
| nek3 | nek3 | coding | downstream | 476536 | 46375319 ~ 46411167 (+) |
| cysltr2b | LOC106581558 | coding | downstream | 674438 | 46573221 ~ 46576187 (+) |
| fndc3a | LOC106581557 | coding | downstream | 680837 | 46579620 ~ 46761993 (+) |
| G2087333 | NA | non-coding | upstream | 16992 | 45881328 ~ 45881554 (+) |
| G2087147 | NA | non-coding | upstream | 96959 | 45799118 ~ 45801587 (+) |
| G2087154 | NA | non-coding | upstream | 177278 | 45720880 ~ 45721268 (+) |
| G2087145 | LOC106581545 | non-coding | upstream | 198818 | 45688027 ~ 45699728 (+) |
| G2087350 | NA | non-coding | downstream | 12778 | 45911561 ~ 45911816 (+) |
| G2087389 | NA | non-coding | downstream | 62774 | 45961557 ~ 45961796 (+) |
| G2087401 | NA | non-coding | downstream | 70828 | 45969611 ~ 45969828 (+) |
| G2087412 | NA | non-coding | downstream | 81926 | 45980709 ~ 45980948 (+) |
| G2087413 | NA | non-coding | downstream | 85624 | 45984407 ~ 45984666 (+) |
| G2087149 | NA | other | upstream | 99953 | 45797099 ~ 45798593 (+) |
| G2085969 | NA | other | upstream | 1488496 | 44408053 ~ 44410050 (+) |
| G2085314 | NA | other | upstream | 1779307 | 44118223 ~ 44119239 (+) |
| G2087569 | NA | other | downstream | 424301 | 46323084 ~ 46323694 (+) |
| G2087592 | LOC106592078 | other | downstream | 595139 | 46493922 ~ 46499497 (+) |
| G2087865 | NA | other | downstream | 1128336 | 47027119 ~ 47028563 (+) |
| prcp | prcp | other | downstream | 1138259 | 47020501 ~ 47056921 (+) |
| G2088729 | NA | other | downstream | 1626657 | 47525440 ~ 47528548 (+) |
