Gene
RNA
| Item | Value |
|---|---|
| gene id | G2087350 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 45911561 ~ 45911816 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2387297 | True | 256 | lncRNA | 0.47 | 1 | 45911561 | 45911816 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| foxo1a | LOC106581554 | coding | upstream | 119766 | 45703165 ~ 45791795 (+) |
| LOC118944695 | NA | coding | upstream | 133582 | 45776962 ~ 45777979 (+) |
| mtus2b | LOC106593344 | coding | upstream | 247256 | 45493223 ~ 45664305 (+) |
| LOC110508103 | LOC106581548 | coding | upstream | 423852 | 45480328 ~ 45487737 (+) |
| usp16 | usp16 | coding | upstream | 432495 | 45443905 ~ 45479066 (+) |
| LOC110508109 | LOC105029023 | coding | downstream | 291781 | 46203597 ~ 46349567 (+) |
| LOC118944693 | NA | coding | downstream | 440179 | 46351995 ~ 46354652 (+) |
| nek3 | nek3 | coding | downstream | 463503 | 46375319 ~ 46411167 (+) |
| cysltr2b | LOC106581558 | coding | downstream | 661405 | 46573221 ~ 46576187 (+) |
| fndc3a | LOC106581557 | coding | downstream | 667804 | 46579620 ~ 46761993 (+) |
| G2087346 | NA | non-coding | upstream | 12778 | 45898546 ~ 45898783 (+) |
| G2087333 | NA | non-coding | upstream | 30007 | 45881328 ~ 45881554 (+) |
| G2087147 | NA | non-coding | upstream | 109974 | 45799118 ~ 45801587 (+) |
| G2087154 | NA | non-coding | upstream | 190293 | 45720880 ~ 45721268 (+) |
| G2087389 | NA | non-coding | downstream | 49741 | 45961557 ~ 45961796 (+) |
| G2087401 | NA | non-coding | downstream | 57795 | 45969611 ~ 45969828 (+) |
| G2087412 | NA | non-coding | downstream | 68893 | 45980709 ~ 45980948 (+) |
| G2087413 | NA | non-coding | downstream | 72591 | 45984407 ~ 45984666 (+) |
| G2087417 | NA | non-coding | downstream | 84645 | 45996461 ~ 45996751 (+) |
| G2087149 | NA | other | upstream | 112968 | 45797099 ~ 45798593 (+) |
| G2085969 | NA | other | upstream | 1501511 | 44408053 ~ 44410050 (+) |
| G2085314 | NA | other | upstream | 1792322 | 44118223 ~ 44119239 (+) |
| G2087569 | NA | other | downstream | 411268 | 46323084 ~ 46323694 (+) |
| G2087592 | LOC106592078 | other | downstream | 582106 | 46493922 ~ 46499497 (+) |
| G2087865 | NA | other | downstream | 1115303 | 47027119 ~ 47028563 (+) |
| prcp | prcp | other | downstream | 1125226 | 47020501 ~ 47056921 (+) |
| G2088729 | NA | other | downstream | 1613624 | 47525440 ~ 47528548 (+) |
