G2087389


Basic Information

Item Value
gene id G2087389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45961557 ~ 45961796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387336
attacggatgcaggcaatgaggcagtgatcgctgagatcttggttgaagacagcagaggtgtatttagaggggaagttggttaggatgatatctatgagggtgcccgtgtttaaggctttggggaggtacctggtaggttcattgataatttgtgtgagattaagggcatcaagtttagattgtaggatggctggggtgttaagcatgttccagtttaggtcgcctagcagcacgagctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387336 True 240 lncRNA 0.47 1 45961557 45961796

Neighbor

gene id symbol gene type direction distance location
foxo1a LOC106581554 coding upstream 169762 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 183578 45776962 ~ 45777979 (+)
mtus2b LOC106593344 coding upstream 297252 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 473848 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 482491 45443905 ~ 45479066 (+)
LOC110508109 LOC105029023 coding downstream 241801 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 390199 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 413523 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 611425 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 617824 46579620 ~ 46761993 (+)
G2087350 NA non-coding upstream 49741 45911561 ~ 45911816 (+)
G2087346 NA non-coding upstream 62774 45898546 ~ 45898783 (+)
G2087333 NA non-coding upstream 80003 45881328 ~ 45881554 (+)
G2087147 NA non-coding upstream 159970 45799118 ~ 45801587 (+)
G2087401 NA non-coding downstream 7815 45969611 ~ 45969828 (+)
G2087412 NA non-coding downstream 18913 45980709 ~ 45980948 (+)
G2087413 NA non-coding downstream 22611 45984407 ~ 45984666 (+)
G2087417 NA non-coding downstream 34665 45996461 ~ 45996751 (+)
G2087442 NA non-coding downstream 78593 46040389 ~ 46055938 (+)
G2087149 NA other upstream 162964 45797099 ~ 45798593 (+)
G2085969 NA other upstream 1551507 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1842318 44118223 ~ 44119239 (+)
G2087569 NA other downstream 361288 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 532126 46493922 ~ 46499497 (+)
G2087865 NA other downstream 1065323 47027119 ~ 47028563 (+)
prcp prcp other downstream 1075246 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1563644 47525440 ~ 47528548 (+)

Expression


Co-expression Network