G2087412


Basic Information

Item Value
gene id G2087412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45980709 ~ 45980948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387363
cacacacacacacaccctcatagtAGActactttaccacacacacacacacacacacactcatagtagactactttaccacacacacacacaccctcatagtAGActactttaccacacacacacacacacacacaccctcatagtAGActactttaccacacacacacacaccctcatagtAGActactttaccacacacacacacactcatagtagactactttaccacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387363 True 240 lncRNA 0.44 1 45980709 45980948

Neighbor

gene id symbol gene type direction distance location
foxo1a LOC106581554 coding upstream 188914 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 202730 45776962 ~ 45777979 (+)
mtus2b LOC106593344 coding upstream 316404 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 493000 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 501643 45443905 ~ 45479066 (+)
LOC110508109 LOC105029023 coding downstream 222649 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 371047 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 394371 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 592273 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 598672 46579620 ~ 46761993 (+)
G2087401 NA non-coding upstream 10881 45969611 ~ 45969828 (+)
G2087389 NA non-coding upstream 18913 45961557 ~ 45961796 (+)
G2087350 NA non-coding upstream 68893 45911561 ~ 45911816 (+)
G2087346 NA non-coding upstream 81926 45898546 ~ 45898783 (+)
G2087333 NA non-coding upstream 99155 45881328 ~ 45881554 (+)
G2087413 NA non-coding downstream 3459 45984407 ~ 45984666 (+)
G2087417 NA non-coding downstream 15513 45996461 ~ 45996751 (+)
G2087442 NA non-coding downstream 59441 46040389 ~ 46055938 (+)
G2087444 NA non-coding downstream 73100 46054048 ~ 46057791 (+)
G2087466 NA non-coding downstream 139751 46120699 ~ 46157420 (+)
G2087149 NA other upstream 182116 45797099 ~ 45798593 (+)
G2085969 NA other upstream 1570659 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1861470 44118223 ~ 44119239 (+)
G2087569 NA other downstream 342136 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 512974 46493922 ~ 46499497 (+)
G2087865 NA other downstream 1046171 47027119 ~ 47028563 (+)
prcp prcp other downstream 1056094 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1544492 47525440 ~ 47528548 (+)

Expression


Co-expression Network