G2087442


Basic Information

Item Value
gene id G2087442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46040389 ~ 46055938 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387395
TTTTTTTTCTAATCCACCAGTTGGTTGTGACTGTTGCTGGAGCGGAAGAGGACATTGGTGCTATGATGGACGGACAGACAATTACTTTACTAAGAGTCTAATCATGTGGTAACCATGACAACAGCTCGTCCGGAGTTATCAGGTAAACAATGGTGAAAAGAAAAGAAGACTAAAGAGAAGGTAAAAAAAAGTGCTAcattatattactgttatatattactgttatatattactgttatatattactgttatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387395 True 254 lncRNA 0.34 2 46040389 46055938

Neighbor

gene id symbol gene type direction distance location
foxo1a LOC106581554 coding upstream 248594 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 262410 45776962 ~ 45777979 (+)
mtus2b LOC106593344 coding upstream 376084 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 552680 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 561323 45443905 ~ 45479066 (+)
LOC110508109 LOC105029023 coding downstream 147659 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 296057 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 319381 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 517283 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 523682 46579620 ~ 46761993 (+)
G2087417 NA non-coding upstream 43638 45996461 ~ 45996751 (+)
G2087413 NA non-coding upstream 55723 45984407 ~ 45984666 (+)
G2087412 NA non-coding upstream 59441 45980709 ~ 45980948 (+)
G2087401 NA non-coding upstream 70561 45969611 ~ 45969828 (+)
G2087389 NA non-coding upstream 78593 45961557 ~ 45961796 (+)
G2087466 NA non-coding downstream 64761 46120699 ~ 46157420 (+)
G2087486 NA non-coding downstream 111030 46166968 ~ 46167244 (+)
G2087504 NA non-coding downstream 135849 46191787 ~ 46193777 (+)
G2087522 NA non-coding downstream 174233 46230171 ~ 46230668 (+)
G2087532 NA non-coding downstream 201235 46257173 ~ 46257500 (+)
G2087149 NA other upstream 241796 45797099 ~ 45798593 (+)
G2085969 NA other upstream 1630339 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1921150 44118223 ~ 44119239 (+)
G2087569 NA other downstream 267146 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 437984 46493922 ~ 46499497 (+)
G2087865 NA other downstream 971181 47027119 ~ 47028563 (+)
prcp prcp other downstream 981104 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1469502 47525440 ~ 47528548 (+)

Expression


Co-expression Network