G2087466


Basic Information

Item Value
gene id G2087466
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46120699 ~ 46157420 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387419
gagagagagagagagagagagacagagagagagagagagagagagagagagagagacagagagacagagagacagagagacagagagacagagagagagagagagagagagagagagagagattaGAATGTGTCAGTACTTAAATGCTAAATCTCGCAATATGGGGTGAATCCTACCTAGGTCCACGCATCAACGTCAATGGGAGACTAAGTGAACACGTTAGCATTAGGTTAGAATTCAGTCCATGAACCCAGTCGGTGTATGAATGAATGagaggatggatgaatgaatgaaaggatggatgaatgaatgagaggatggatgaatgaatgagaggatggatgaatgaatgaaaggatggatgaatgaatgaaaggATGGATGAATGATTGagaggatggatgaatgaatgagaggatggatgaatgaatgagagGATGGATGAATGAGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387419 True 453 lncRNA 0.43 3 46120699 46157420

Neighbor

gene id symbol gene type direction distance location
foxo1a LOC106581554 coding upstream 328904 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 342720 45776962 ~ 45777979 (+)
mtus2b LOC106593344 coding upstream 456394 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 632990 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 641633 45443905 ~ 45479066 (+)
LOC110508109 LOC105029023 coding downstream 46177 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 194575 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 217899 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 415801 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 422200 46579620 ~ 46761993 (+)
G2087444 NA non-coding upstream 62908 46054048 ~ 46057791 (+)
G2087442 NA non-coding upstream 64761 46040389 ~ 46055938 (+)
G2087417 NA non-coding upstream 123948 45996461 ~ 45996751 (+)
G2087413 NA non-coding upstream 136033 45984407 ~ 45984666 (+)
G2087412 NA non-coding upstream 139751 45980709 ~ 45980948 (+)
G2087486 NA non-coding downstream 9548 46166968 ~ 46167244 (+)
G2087504 NA non-coding downstream 34367 46191787 ~ 46193777 (+)
G2087522 NA non-coding downstream 72751 46230171 ~ 46230668 (+)
G2087532 NA non-coding downstream 99753 46257173 ~ 46257500 (+)
G2087552 NA non-coding downstream 139812 46297232 ~ 46297585 (+)
G2087149 NA other upstream 322106 45797099 ~ 45798593 (+)
G2085969 NA other upstream 1710649 44408053 ~ 44410050 (+)
G2085314 NA other upstream 2001460 44118223 ~ 44119239 (+)
G2087569 NA other downstream 165664 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 336502 46493922 ~ 46499497 (+)
G2087865 NA other downstream 869699 47027119 ~ 47028563 (+)
prcp prcp other downstream 879622 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1368020 47525440 ~ 47528548 (+)

Expression


Co-expression Network