Gene
RNA
| Item | Value |
|---|---|
| gene id | G2087552 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 46297232 ~ 46297585 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2387574 | True | 242 | lncRNA | 0.43 | 2 | 46297232 | 46297585 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| foxo1a | LOC106581554 | coding | upstream | 505437 | 45703165 ~ 45791795 (+) |
| LOC118944695 | NA | coding | upstream | 519253 | 45776962 ~ 45777979 (+) |
| mtus2b | LOC106593344 | coding | upstream | 632927 | 45493223 ~ 45664305 (+) |
| LOC110508103 | LOC106581548 | coding | upstream | 809523 | 45480328 ~ 45487737 (+) |
| usp16 | usp16 | coding | upstream | 818166 | 45443905 ~ 45479066 (+) |
| LOC118944693 | NA | coding | downstream | 54410 | 46351995 ~ 46354652 (+) |
| nek3 | nek3 | coding | downstream | 77734 | 46375319 ~ 46411167 (+) |
| cysltr2b | LOC106581558 | coding | downstream | 275636 | 46573221 ~ 46576187 (+) |
| fndc3a | LOC106581557 | coding | downstream | 282035 | 46579620 ~ 46761993 (+) |
| LOC118944696 | NA | coding | downstream | 445411 | 46742996 ~ 46745025 (+) |
| G2087532 | NA | non-coding | upstream | 39732 | 46257173 ~ 46257500 (+) |
| G2087522 | NA | non-coding | upstream | 66564 | 46230171 ~ 46230668 (+) |
| G2087504 | NA | non-coding | upstream | 103455 | 46191787 ~ 46193777 (+) |
| G2087486 | NA | non-coding | upstream | 129988 | 46166968 ~ 46167244 (+) |
| G2087466 | NA | non-coding | upstream | 139812 | 46120699 ~ 46157420 (+) |
| G2087567 | NA | non-coding | downstream | 20964 | 46318549 ~ 46319166 (+) |
| G2087570 | NA | non-coding | downstream | 26484 | 46324069 ~ 46324541 (+) |
| G2087576 | NA | non-coding | downstream | 39743 | 46337328 ~ 46337823 (+) |
| LOC110508109 | LOC105029023 | non-coding | downstream | 45048 | 46203597 ~ 46349567 (+) |
| G2087509 | NA | non-coding | downstream | 51543 | 46349128 ~ 46354481 (+) |
| G2087149 | NA | other | upstream | 498639 | 45797099 ~ 45798593 (+) |
| G2085969 | NA | other | upstream | 1887182 | 44408053 ~ 44410050 (+) |
| G2085314 | NA | other | upstream | 2177993 | 44118223 ~ 44119239 (+) |
| G2087569 | NA | other | downstream | 25499 | 46323084 ~ 46323694 (+) |
| G2087592 | LOC106592078 | other | downstream | 196337 | 46493922 ~ 46499497 (+) |
| G2087865 | NA | other | downstream | 729534 | 47027119 ~ 47028563 (+) |
| prcp | prcp | other | downstream | 739457 | 47020501 ~ 47056921 (+) |
| G2088729 | NA | other | downstream | 1227855 | 47525440 ~ 47528548 (+) |
