G2087567


Basic Information

Item Value
gene id G2087567
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46318549 ~ 46319166 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387595
ATAGCAGACAGACTACCAGTGTGATTACATAGCAGACAGACTACCAGTGTGTTTCTATAGCAGACAGACTACCAGTGTGTTTACATAGCAGACAGACTACCAGTGTGTTTCCATAGCAGACAGACTACCAGTGTGTTTCTATAGCAGACAGACTACCAGTGTGTTTCCATAGCAGACAGACTACCAGTGTGATTACATAGCAGACAGACTACCAGTGTGTTTCTATAGCAGACAGACTACCAGTGTGTTTACATAGCAGACAGACTACCAGTGTGTTTCCATAGCAGACAGACTACCAGTGTGTTTCTATAGCAGACAGACTACCAGTGTGTTTCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387595 True 338 lncRNA 0.44 2 46318549 46319166

Neighbor

gene id symbol gene type direction distance location
foxo1a LOC106581554 coding upstream 526754 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 540570 45776962 ~ 45777979 (+)
mtus2b LOC106593344 coding upstream 654244 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 830840 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 839483 45443905 ~ 45479066 (+)
LOC118944693 NA coding downstream 32829 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 56153 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 254055 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 260454 46579620 ~ 46761993 (+)
LOC118944696 NA coding downstream 423830 46742996 ~ 46745025 (+)
G2087552 NA non-coding upstream 20964 46297232 ~ 46297585 (+)
G2087532 NA non-coding upstream 61049 46257173 ~ 46257500 (+)
G2087522 NA non-coding upstream 87881 46230171 ~ 46230668 (+)
G2087504 NA non-coding upstream 124772 46191787 ~ 46193777 (+)
G2087486 NA non-coding upstream 151305 46166968 ~ 46167244 (+)
G2087570 NA non-coding downstream 4903 46324069 ~ 46324541 (+)
G2087576 NA non-coding downstream 18162 46337328 ~ 46337823 (+)
LOC110508109 LOC105029023 non-coding downstream 23467 46203597 ~ 46349567 (+)
G2087509 NA non-coding downstream 29962 46349128 ~ 46354481 (+)
G2087580 NA non-coding downstream 39340 46358506 ~ 46359599 (+)
G2087149 NA other upstream 519956 45797099 ~ 45798593 (+)
G2085969 NA other upstream 1908499 44408053 ~ 44410050 (+)
G2085314 NA other upstream 2199310 44118223 ~ 44119239 (+)
G2087569 NA other downstream 3918 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 174756 46493922 ~ 46499497 (+)
G2087865 NA other downstream 707953 47027119 ~ 47028563 (+)
prcp prcp other downstream 717876 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1206274 47525440 ~ 47528548 (+)

Expression


Co-expression Network