G2087570


Basic Information

Item Value
gene id G2087570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46324069 ~ 46324541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387601
aaatgttttttttgcaaCGTGGAAAATTAAAAGAAGTGTTGGaacctggtcaaacgtagtgcactaaatagggaatagtggtcaaacgtagtgcactaaatagggaatagtggtcaaacgtagtgcactaaatagggaatagtggtcaaacgtagtgcactaaatagggaatagtggtcaaacgtagtgcactaaatagggaatagtggtcaaacgtagtgcactaaatagggaatagtggtcaAACatggtgcactaaatagggaatagtggtcaaacgtagtgcactaaatagggaatagtggtcaaacgtagtgcactaaatagggaatagtggtcaaaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387601 True 345 lncRNA 0.39 2 46324069 46324541

Neighbor

gene id symbol gene type direction distance location
foxo1a LOC106581554 coding upstream 532274 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 546090 45776962 ~ 45777979 (+)
mtus2b LOC106593344 coding upstream 659764 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 836360 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 845003 45443905 ~ 45479066 (+)
LOC118944693 NA coding downstream 27454 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 50778 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 248680 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 255079 46579620 ~ 46761993 (+)
LOC118944696 NA coding downstream 418455 46742996 ~ 46745025 (+)
G2087567 NA non-coding upstream 4903 46318549 ~ 46319166 (+)
G2087552 NA non-coding upstream 26484 46297232 ~ 46297585 (+)
G2087532 NA non-coding upstream 66569 46257173 ~ 46257500 (+)
G2087522 NA non-coding upstream 93401 46230171 ~ 46230668 (+)
G2087504 NA non-coding upstream 130292 46191787 ~ 46193777 (+)
G2087576 NA non-coding downstream 12787 46337328 ~ 46337823 (+)
LOC110508109 LOC105029023 non-coding downstream 18092 46203597 ~ 46349567 (+)
G2087509 NA non-coding downstream 24587 46349128 ~ 46354481 (+)
G2087580 NA non-coding downstream 33965 46358506 ~ 46359599 (+)
G2087569 NA other upstream 375 46323084 ~ 46323694 (+)
G2087149 NA other upstream 525476 45797099 ~ 45798593 (+)
G2085969 NA other upstream 1914019 44408053 ~ 44410050 (+)
G2087592 LOC106592078 other downstream 169381 46493922 ~ 46499497 (+)
G2087865 NA other downstream 702578 47027119 ~ 47028563 (+)
prcp prcp other downstream 712501 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1200899 47525440 ~ 47528548 (+)
G2088732 NA other downstream 1207881 47532422 ~ 47537945 (+)

Expression


Co-expression Network