G2087624


Basic Information

Item Value
gene id G2087624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46442939 ~ 46454547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387694
tTGGATTTCTGTGtcttgttgtgaaattgttagatattactagttagatactactgcactgactgtactgttggagctagaaacacaagcattagatattactgtactgttggagctagaaacacaagcattagatattactgtactgttggagctagaaacacaagcattagatattactgtactgttggagctagaaacacaagcattagatattactgtactgttggagctagagacattagatattactgtactgttggagctagagatatttagatattactgtactgttggagctagagacattagatattactgtactgttggagctagagacattagatattactgtactgttggagctagagacattagatattactgtactgttggagctagagatatttagatattactgtactgttggagctagagacattagatattactgtactgttggagctagagacattagatattactgtactgttggagctagagacattagatattactgtactgttggagctagagacattagatattactgtactgttggagctagagacattagatatcactgtactgttggagctataatCACATCATGTAGAATTACTTATCACTCTCCTGACTGAGGATCCAAGGCAAATGGGTCACATGTTCACCTATGTTAGAATTCCTAGGCTAGGTTGtatcaacctcatgatgggtacaggggaACATTCTAGCATCATGTActaacctaaacctatcgctgttacattgaactgggtgaatgtgaatgacagtaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387694 True 798 lncRNA 0.37 3 46442939 46454547

Neighbor

gene id symbol gene type direction distance location
nek3 nek3 coding upstream 31772 46375319 ~ 46411167 (+)
LOC118944693 NA coding upstream 88287 46351995 ~ 46354652 (+)
LOC110508109 LOC105029023 coding upstream 93372 46203597 ~ 46349567 (+)
foxo1a LOC106581554 coding upstream 651144 45703165 ~ 45791795 (+)
cysltr2b LOC106581558 coding downstream 118674 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 125073 46579620 ~ 46761993 (+)
LOC118944696 NA coding downstream 288449 46742996 ~ 46745025 (+)
mlnr LOC106581570 coding downstream 319865 46774412 ~ 46783031 (+)
zgc:153184 LOC106581572 coding downstream 367380 46821927 ~ 46897922 (+)
G2087594 NA non-coding upstream 7140 46434854 ~ 46435799 (+)
G2087580 NA non-coding upstream 83340 46358506 ~ 46359599 (+)
G2087509 NA non-coding upstream 88458 46349128 ~ 46354481 (+)
G2087633 NA non-coding downstream 3981 46458528 ~ 46461373 (+)
G2087635 NA non-coding downstream 5411 46459958 ~ 46462351 (+)
G2087643 NA non-coding downstream 31243 46485790 ~ 46487163 (+)
G2087592 LOC106592078 non-coding downstream 39375 46493922 ~ 46499497 (+)
G2087654 NA non-coding downstream 55564 46510111 ~ 46525515 (+)
G2087569 NA other upstream 119245 46323084 ~ 46323694 (+)
G2087149 NA other upstream 644346 45797099 ~ 45798593 (+)
mtus2b LOC106593344 other upstream 913000 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 other upstream 955202 45480328 ~ 45487737 (+)
G2085969 NA other upstream 2032889 44408053 ~ 44410050 (+)
G2087865 NA other downstream 572572 47027119 ~ 47028563 (+)
prcp prcp other downstream 582495 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1070893 47525440 ~ 47528548 (+)
G2088732 NA other downstream 1077875 47532422 ~ 47537945 (+)

Expression


Co-expression Network