G2087643


Basic Information

Item Value
gene id G2087643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46485790 ~ 46487163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387722
ACATTATATTAACTGTCTTTCCCAACACTACAAAGCAATGTTGTTACCTAGCGACCTTATATTAACTGTCATTCCCAACACTACACAGCAATGTTGTTACCTAGCAACATCATATTAACTGTCTTTCCCAACACTACACAGCAATGCTGTTACCTAGCAACATTACATTAACTGTCTTTCCCAACACTACACAGCAATGTTGTTACCTAGCAACATTATATTAACTGTCTTTCCCAACACTACACAGTAATGTTGTTACCTAGCAACATCATATTAACTGTCTTTCCCAACACTACACAGCAATGTTGTTACCTAGCAACATTACATTAACTGTCTTTCCCAACACTACACAGCAATGCTGTTACCTAGTGATGACATATTAACTGTCTTTCCCAACACTACACAGCAATGCTGTTACCTAGCAACATTACATTAACTGTCTTTCCCAACACTACACAGCAATGTTGTTACCTAGCGACATTACATTAACTGTCTTTCCCAACACTACACAGCAATGCTGCTACCTAGCAACATTACATTAACTGTCTTTCCCAACACTACACAGCAATGTTGTTACCTAGCAACATTACATTAACTGTCTTTCCCAACACTACACAGCAATGTTGTTACCTAGTGATGACATATTAACTGTCTTTCCCAACACTACACAGCAATGCTGTTACCTAGTGATGACATATTAACTGTATTTCCCAACACTACACAGCAATGCTGTTACCTAGCAACATTACATTAACTGTCTTTCCCAACACTACACAGCAATGCTGTTACCTAGCAACATTACATTAACTGTCTTTCCCAACACTACACAGCAATGTTGTTACCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387722 True 845 lncRNA 0.38 2 46485790 46487163

Neighbor

gene id symbol gene type direction distance location
nek3 nek3 coding upstream 74623 46375319 ~ 46411167 (+)
LOC118944693 NA coding upstream 131138 46351995 ~ 46354652 (+)
LOC110508109 LOC105029023 coding upstream 136223 46203597 ~ 46349567 (+)
foxo1a LOC106581554 coding upstream 693995 45703165 ~ 45791795 (+)
cysltr2b LOC106581558 coding downstream 86058 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 92457 46579620 ~ 46761993 (+)
LOC118944696 NA coding downstream 255833 46742996 ~ 46745025 (+)
mlnr LOC106581570 coding downstream 287249 46774412 ~ 46783031 (+)
zgc:153184 LOC106581572 coding downstream 334764 46821927 ~ 46897922 (+)
G2087635 NA non-coding upstream 23439 46459958 ~ 46462351 (+)
G2087633 NA non-coding upstream 24417 46458528 ~ 46461373 (+)
G2087624 NA non-coding upstream 31243 46442939 ~ 46454547 (+)
G2087626 NA non-coding upstream 38204 46446613 ~ 46447586 (+)
G2087594 NA non-coding upstream 49991 46434854 ~ 46435799 (+)
G2087592 LOC106592078 non-coding downstream 6759 46493922 ~ 46499497 (+)
G2087654 NA non-coding downstream 22948 46510111 ~ 46525515 (+)
G2087656 NA non-coding downstream 24372 46511535 ~ 46525352 (+)
G2087655 NA non-coding downstream 29012 46516175 ~ 46517158 (+)
G2087659 NA non-coding downstream 48345 46535508 ~ 46536128 (+)
G2087569 NA other upstream 162096 46323084 ~ 46323694 (+)
G2087149 NA other upstream 687197 45797099 ~ 45798593 (+)
mtus2b LOC106593344 other upstream 955851 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 other upstream 998053 45480328 ~ 45487737 (+)
G2085969 NA other upstream 2075740 44408053 ~ 44410050 (+)
G2087865 NA other downstream 539956 47027119 ~ 47028563 (+)
prcp prcp other downstream 549879 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1038277 47525440 ~ 47528548 (+)
G2088732 NA other downstream 1045259 47532422 ~ 47537945 (+)

Expression


Co-expression Network