Gene
RNA
| Item | Value |
|---|---|
| gene id | G2087656 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 46511535 ~ 46525352 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2387743 | False | 348 | lncRNA | 0.45 | 4 | 46511535 | 46525352 |
| TU2387742 | True | 214 | lncRNA | 0.45 | 2 | 46518843 | 46525352 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nek3 | nek3 | coding | upstream | 100368 | 46375319 ~ 46411167 (+) |
| LOC118944693 | NA | coding | upstream | 156883 | 46351995 ~ 46354652 (+) |
| LOC110508109 | LOC105029023 | coding | upstream | 161968 | 46203597 ~ 46349567 (+) |
| foxo1a | LOC106581554 | coding | upstream | 719740 | 45703165 ~ 45791795 (+) |
| cysltr2b | LOC106581558 | coding | downstream | 47869 | 46573221 ~ 46576187 (+) |
| fndc3a | LOC106581557 | coding | downstream | 54268 | 46579620 ~ 46761993 (+) |
| LOC118944696 | NA | coding | downstream | 217644 | 46742996 ~ 46745025 (+) |
| mlnr | LOC106581570 | coding | downstream | 249060 | 46774412 ~ 46783031 (+) |
| zgc:153184 | LOC106581572 | coding | downstream | 296575 | 46821927 ~ 46897922 (+) |
| G2087592 | LOC106592078 | non-coding | upstream | 12038 | 46493922 ~ 46499497 (+) |
| G2087596 | NA | non-coding | upstream | 13590 | 46453058 ~ 46497945 (+) |
| G2087659 | NA | non-coding | downstream | 10156 | 46535508 ~ 46536128 (+) |
| G2087664 | NA | non-coding | downstream | 20144 | 46545496 ~ 46545889 (+) |
| G2087704 | NA | non-coding | downstream | 111268 | 46636620 ~ 46637423 (+) |
| G2087756 | NA | non-coding | downstream | 183556 | 46708908 ~ 46709880 (+) |
| G2087569 | NA | other | upstream | 187841 | 46323084 ~ 46323694 (+) |
| G2087149 | NA | other | upstream | 712942 | 45797099 ~ 45798593 (+) |
| mtus2b | LOC106593344 | other | upstream | 981596 | 45493223 ~ 45664305 (+) |
| LOC110508103 | LOC106581548 | other | upstream | 1023798 | 45480328 ~ 45487737 (+) |
| G2087865 | NA | other | downstream | 501767 | 47027119 ~ 47028563 (+) |
| prcp | prcp | other | downstream | 511690 | 47020501 ~ 47056921 (+) |
| G2088729 | NA | other | downstream | 1000088 | 47525440 ~ 47528548 (+) |
| G2088732 | NA | other | downstream | 1007070 | 47532422 ~ 47537945 (+) |
| G2088870 | NA | other | downstream | 1328754 | 47854106 ~ 47864829 (+) |
