G2087756


Basic Information

Item Value
gene id G2087756
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46708908 ~ 46709880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387898
gcagcgtaaaggtgggggggtaatgcaaatagtctgggtggccatttgattggCTTTTCtggagtcttattgcttggggggtagaagctgtttagaagcctcttggacctagacttggcgctctggtatttttagggccttcctctgacaccgcctagtatataggtcctggatggcaggaagcttggccccggtgatgtactgggccgtacgcactacatcCAGCTGGTCTCACAACCGAAGATCACATGTAACCAGGACTTTTGAGACCAGCcgcctggacagctgatgaaactgtaggtttgcacaaccaaagaatttctgcacaaactgtctcagggaagctcatctgcatgttcGTCGTCCtcgccagggtcttgacctgactgagGTCTGGCGTCGTTACCGACTTaagcattgtgaacagagtgccccatggtggctggcggtggggttatggtatgggccggcacaagctacggacaacaaacacaattgtatttattgatggcaatttgaatgcacagagatcaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaacccccaaaacagcaatgcaggtgtagaagcaccgtaACAATAAACATTCACTAATAACTGTAGAAGCACCGTAACAATAAATATTCACTAATAACTGTAGAAGCACCGTAACAATAAACATTCACTAATAACTGTAGAAGCACCGTAACAATAAACATTCACTAATAACTGTAGAAGCACCGTAACAATAAATATTCACTAATAACTGTAGAAGCACCGTAACAATAAATATTCACTAATAACTGTAGAAGCACCGTAACAATAAATATTCACTAATAACTGTAGAAGCACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387898 True 899 lncRNA 0.44 2 46708908 46709880

Neighbor

gene id symbol gene type direction distance location
cysltr2b LOC106581558 coding upstream 132721 46573221 ~ 46576187 (+)
nek3 nek3 coding upstream 297741 46375319 ~ 46411167 (+)
LOC118944693 NA coding upstream 354256 46351995 ~ 46354652 (+)
LOC110508109 LOC105029023 coding upstream 359341 46203597 ~ 46349567 (+)
LOC118944695 NA coding upstream 930929 45776962 ~ 45777979 (+)
LOC118944696 NA coding downstream 33116 46742996 ~ 46745025 (+)
mlnr LOC106581570 coding downstream 64532 46774412 ~ 46783031 (+)
zgc:153184 LOC106581572 coding downstream 112047 46821927 ~ 46897922 (+)
LOC110508118 cssa20h3orf52 coding downstream 196970 46906850 ~ 46930260 (+)
guca1c LOC106581568 coding downstream 236990 46946870 ~ 46959779 (+)
G2087704 NA non-coding upstream 71485 46636620 ~ 46637423 (+)
G2087664 NA non-coding upstream 163019 46545496 ~ 46545889 (+)
G2087659 NA non-coding upstream 172780 46535508 ~ 46536128 (+)
G2087654 NA non-coding upstream 183393 46510111 ~ 46525515 (+)
fndc3a LOC106581557 non-coding downstream 48322 46579620 ~ 46761993 (+)
G2087799 NA non-coding downstream 107213 46817093 ~ 46820232 (+)
G2087812 NA non-coding downstream 132175 46842055 ~ 46848568 (+)
G2087829 NA non-coding downstream 190723 46900603 ~ 46903258 (+)
G2087833 NA non-coding downstream 205487 46915367 ~ 46915941 (+)
G2087592 LOC106592078 other upstream 212021 46493922 ~ 46499497 (+)
G2087569 NA other upstream 385214 46323084 ~ 46323694 (+)
G2087149 NA other upstream 910315 45797099 ~ 45798593 (+)
mtus2b LOC106593344 other upstream 1178969 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 other upstream 1221171 45480328 ~ 45487737 (+)
G2087865 NA other downstream 317239 47027119 ~ 47028563 (+)
prcp prcp other downstream 327162 47020501 ~ 47056921 (+)
G2088729 NA other downstream 815560 47525440 ~ 47528548 (+)
G2088732 NA other downstream 822542 47532422 ~ 47537945 (+)
G2088870 NA other downstream 1144226 47854106 ~ 47864829 (+)

Expression


Co-expression Network