G2087799


Basic Information

Item Value
gene id G2087799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46817093 ~ 46820232 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387943
aatctagaatcggctttctattccgcaacaaagcctccttcactcacgccgccaagcttaccctagtaaaactgactatcctaccgatcctcgacttcggcgatgtcatctacaaaatagcttccaatactctactcagcaaactgaatgcagtttatcacagtgccatccgttttgttactaaagcaccttataccacccaccactgcgacctgtatgctctagtcggctggccctcgctacatattcctcgccagacccactggctccaggtcatctacaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387943 True 284 lncRNA 0.49 2 46817093 46820232

Neighbor

gene id symbol gene type direction distance location
mlnr LOC106581570 coding upstream 34062 46774412 ~ 46783031 (+)
fndc3a LOC106581557 coding upstream 58776 46579620 ~ 46761993 (+)
LOC118944696 NA coding upstream 72068 46742996 ~ 46745025 (+)
cysltr2b LOC106581558 coding upstream 240906 46573221 ~ 46576187 (+)
nek3 nek3 coding upstream 405926 46375319 ~ 46411167 (+)
zgc:153184 LOC106581572 coding downstream 1695 46821927 ~ 46897922 (+)
LOC110508118 cssa20h3orf52 coding downstream 86618 46906850 ~ 46930260 (+)
guca1c LOC106581568 coding downstream 126638 46946870 ~ 46959779 (+)
LOC110508116 thrsp coding downstream 151055 46971287 ~ 46972031 (+)
rab30 rab30 coding downstream 157871 46978103 ~ 47003404 (+)
G2087756 NA non-coding upstream 107213 46708908 ~ 46709880 (+)
G2087704 NA non-coding upstream 179670 46636620 ~ 46637423 (+)
G2087664 NA non-coding upstream 271204 46545496 ~ 46545889 (+)
G2087659 NA non-coding upstream 280965 46535508 ~ 46536128 (+)
G2087812 NA non-coding downstream 21823 46842055 ~ 46848568 (+)
G2087829 NA non-coding downstream 80371 46900603 ~ 46903258 (+)
G2087833 NA non-coding downstream 95135 46915367 ~ 46915941 (+)
G2087836 NA non-coding downstream 97665 46917897 ~ 46918268 (+)
G2087727 NA non-coding downstream 116581 46936813 ~ 46937184 (+)
G2087592 LOC106592078 other upstream 320206 46493922 ~ 46499497 (+)
G2087569 NA other upstream 493399 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1018500 45797099 ~ 45798593 (+)
mtus2b LOC106593344 other upstream 1287154 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 other upstream 1329356 45480328 ~ 45487737 (+)
G2087865 NA other downstream 206887 47027119 ~ 47028563 (+)
prcp prcp other downstream 216810 47020501 ~ 47056921 (+)
G2088729 NA other downstream 705208 47525440 ~ 47528548 (+)
G2088732 NA other downstream 712190 47532422 ~ 47537945 (+)
G2088870 NA other downstream 1033874 47854106 ~ 47864829 (+)

Expression


Co-expression Network