Gene
RNA
| Item | Value |
|---|---|
| gene id | G2087812 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 46842055 ~ 46848568 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2387958 | True | 256 | lncRNA | 0.41 | 2 | 46842055 | 46848568 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mlnr | LOC106581570 | coding | upstream | 59024 | 46774412 ~ 46783031 (+) |
| fndc3a | LOC106581557 | coding | upstream | 83738 | 46579620 ~ 46761993 (+) |
| LOC118944696 | NA | coding | upstream | 97030 | 46742996 ~ 46745025 (+) |
| cysltr2b | LOC106581558 | coding | upstream | 265868 | 46573221 ~ 46576187 (+) |
| nek3 | nek3 | coding | upstream | 430888 | 46375319 ~ 46411167 (+) |
| LOC110508118 | cssa20h3orf52 | coding | downstream | 58282 | 46906850 ~ 46930260 (+) |
| guca1c | LOC106581568 | coding | downstream | 98302 | 46946870 ~ 46959779 (+) |
| LOC110508116 | thrsp | coding | downstream | 122719 | 46971287 ~ 46972031 (+) |
| rab30 | rab30 | coding | downstream | 129535 | 46978103 ~ 47003404 (+) |
| prcp | prcp | coding | downstream | 171933 | 47020501 ~ 47056921 (+) |
| G2087799 | NA | non-coding | upstream | 21823 | 46817093 ~ 46820232 (+) |
| G2087756 | NA | non-coding | upstream | 132175 | 46708908 ~ 46709880 (+) |
| G2087704 | NA | non-coding | upstream | 204632 | 46636620 ~ 46637423 (+) |
| G2087664 | NA | non-coding | upstream | 296166 | 46545496 ~ 46545889 (+) |
| G2087829 | NA | non-coding | downstream | 52035 | 46900603 ~ 46903258 (+) |
| G2087833 | NA | non-coding | downstream | 66799 | 46915367 ~ 46915941 (+) |
| G2087836 | NA | non-coding | downstream | 69329 | 46917897 ~ 46918268 (+) |
| G2087727 | NA | non-coding | downstream | 88245 | 46936813 ~ 46937184 (+) |
| G2087838 | NA | non-coding | downstream | 94414 | 46942982 ~ 46943760 (+) |
| G2087592 | LOC106592078 | other | upstream | 345168 | 46493922 ~ 46499497 (+) |
| G2087569 | NA | other | upstream | 518361 | 46323084 ~ 46323694 (+) |
| G2087149 | NA | other | upstream | 1043462 | 45797099 ~ 45798593 (+) |
| mtus2b | LOC106593344 | other | upstream | 1312116 | 45493223 ~ 45664305 (+) |
| LOC110508103 | LOC106581548 | other | upstream | 1354318 | 45480328 ~ 45487737 (+) |
| G2087865 | NA | other | downstream | 178551 | 47027119 ~ 47028563 (+) |
| G2088729 | NA | other | downstream | 676872 | 47525440 ~ 47528548 (+) |
| G2088732 | NA | other | downstream | 683854 | 47532422 ~ 47537945 (+) |
| G2088870 | NA | other | downstream | 1005538 | 47854106 ~ 47864829 (+) |
