G2087833


Basic Information

Item Value
gene id G2087833
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46915367 ~ 46915941 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2387991
CTCTGAGAAATGTTCACATCACCAAGCCACTTCTTAGCAGTGCTAAGGAAGTGGTGAAATACATATATAGGTGTGTCTGTAAAGAATTCTAGTCACAGAATCCTCAGCATGCGTGGTCGTATCTGTTCTTCACCAGACTGTGGTTGGCTTCCATCCTGTCTTTACACAGTTAGGAACAAGTTAACAGCAGGTAACATTTAGGTGACAGGTAACATTTAGGTAACAGGTAACATTTAGGTAACAGGTAACATTTAGGTAGCAGGTAACATTTAGGTAGCAGGTAACATTTAGGTAGCAGGTAACATTTAGGTAGCAGGTAACATTTAGGTAACATGTAACAGTTAGGTAACAGGTAACATTTAGGTAACAGGTAACATTTAGGTAACAGGTAACATTTAGGTAACAGGTAACATTTAGGTAGCAGGTAACATTTAGGTAGCAGGTAACATTTAGGTAACATGTAACAT

Function

NR:

description
LOW QUALITY PROTEIN: AP2-associated protein kinase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2387991 True 467 lncRNA 0.39 2 46915367 46915941

Neighbor

gene id symbol gene type direction distance location
zgc:153184 LOC106581572 coding upstream 17445 46821927 ~ 46897922 (+)
mlnr LOC106581570 coding upstream 132336 46774412 ~ 46783031 (+)
fndc3a LOC106581557 coding upstream 157050 46579620 ~ 46761993 (+)
LOC118944696 NA coding upstream 170342 46742996 ~ 46745025 (+)
cysltr2b LOC106581558 coding upstream 339180 46573221 ~ 46576187 (+)
guca1c LOC106581568 coding downstream 30929 46946870 ~ 46959779 (+)
LOC110508116 thrsp coding downstream 55346 46971287 ~ 46972031 (+)
rab30 rab30 coding downstream 62162 46978103 ~ 47003404 (+)
prcp prcp coding downstream 104560 47020501 ~ 47056921 (+)
LOC110513068 fam181b coding downstream 158589 47074530 ~ 47076721 (+)
G2087829 NA non-coding upstream 12109 46900603 ~ 46903258 (+)
G2087812 NA non-coding upstream 66799 46842055 ~ 46848568 (+)
G2087799 NA non-coding upstream 95135 46817093 ~ 46820232 (+)
G2087756 NA non-coding upstream 205487 46708908 ~ 46709880 (+)
G2087836 NA non-coding downstream 1956 46917897 ~ 46918268 (+)
G2087727 NA non-coding downstream 20872 46936813 ~ 46937184 (+)
G2087838 NA non-coding downstream 27041 46942982 ~ 46943760 (+)
G2087731 NA non-coding downstream 119649 47035590 ~ 47035929 (+)
G2087592 LOC106592078 other upstream 418480 46493922 ~ 46499497 (+)
G2087569 NA other upstream 591673 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1116774 45797099 ~ 45798593 (+)
mtus2b LOC106593344 other upstream 1385428 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 other upstream 1427630 45480328 ~ 45487737 (+)
G2087865 NA other downstream 111178 47027119 ~ 47028563 (+)
G2088729 NA other downstream 609499 47525440 ~ 47528548 (+)
G2088732 NA other downstream 616481 47532422 ~ 47537945 (+)
G2088870 NA other downstream 938165 47854106 ~ 47864829 (+)

Expression


Co-expression Network