Gene
RNA
| Item | Value |
|---|---|
| gene id | G2087838 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 46942982 ~ 46943760 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2387996 | True | 245 | lncRNA | 0.53 | 2 | 46942982 | 46943760 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508118 | cssa20h3orf52 | coding | upstream | 12722 | 46906850 ~ 46930260 (+) |
| zgc:153184 | LOC106581572 | coding | upstream | 45060 | 46821927 ~ 46897922 (+) |
| mlnr | LOC106581570 | coding | upstream | 159951 | 46774412 ~ 46783031 (+) |
| fndc3a | LOC106581557 | coding | upstream | 184665 | 46579620 ~ 46761993 (+) |
| guca1c | LOC106581568 | coding | downstream | 3110 | 46946870 ~ 46959779 (+) |
| LOC110508116 | thrsp | coding | downstream | 27527 | 46971287 ~ 46972031 (+) |
| rab30 | rab30 | coding | downstream | 34343 | 46978103 ~ 47003404 (+) |
| prcp | prcp | coding | downstream | 76741 | 47020501 ~ 47056921 (+) |
| LOC110513068 | fam181b | coding | downstream | 130770 | 47074530 ~ 47076721 (+) |
| G2087727 | NA | non-coding | upstream | 5798 | 46936813 ~ 46937184 (+) |
| G2087836 | NA | non-coding | upstream | 24714 | 46917897 ~ 46918268 (+) |
| G2087833 | NA | non-coding | upstream | 27041 | 46915367 ~ 46915941 (+) |
| G2087829 | NA | non-coding | upstream | 39724 | 46900603 ~ 46903258 (+) |
| G2087812 | NA | non-coding | upstream | 94414 | 46842055 ~ 46848568 (+) |
| G2087731 | NA | non-coding | downstream | 91830 | 47035590 ~ 47035929 (+) |
| G2087869 | NA | non-coding | downstream | 96352 | 47040112 ~ 47040808 (+) |
| G2087881 | NA | non-coding | downstream | 120600 | 47064360 ~ 47064591 (+) |
| G2088382 | NA | non-coding | downstream | 133983 | 47077743 ~ 47078349 (+) |
| G2087592 | LOC106592078 | other | upstream | 446095 | 46493922 ~ 46499497 (+) |
| G2087569 | NA | other | upstream | 619288 | 46323084 ~ 46323694 (+) |
| G2087149 | NA | other | upstream | 1144389 | 45797099 ~ 45798593 (+) |
| mtus2b | LOC106593344 | other | upstream | 1413043 | 45493223 ~ 45664305 (+) |
| LOC110508103 | LOC106581548 | other | upstream | 1455245 | 45480328 ~ 45487737 (+) |
| G2087865 | NA | other | downstream | 83359 | 47027119 ~ 47028563 (+) |
| G2088729 | NA | other | downstream | 581680 | 47525440 ~ 47528548 (+) |
| G2088732 | NA | other | downstream | 588662 | 47532422 ~ 47537945 (+) |
| G2088870 | NA | other | downstream | 910346 | 47854106 ~ 47864829 (+) |
