Gene
RNA
| Item | Value |
|---|---|
| gene id | G2087869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 47040112 ~ 47040808 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2388028 | False | 242 | lncRNA | 0.36 | 3 | 47040112 | 47040808 |
| TU2388029 | False | 268 | lncRNA | 0.36 | 2 | 47040112 | 47040808 |
| TU2388031 | True | 398 | lncRNA | 0.38 | 2 | 47040112 | 47040808 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rab30 | rab30 | coding | upstream | 36708 | 46978103 ~ 47003404 (+) |
| LOC110508116 | thrsp | coding | upstream | 68081 | 46971287 ~ 46972031 (+) |
| guca1c | LOC106581568 | coding | upstream | 80333 | 46946870 ~ 46959779 (+) |
| LOC110508118 | cssa20h3orf52 | coding | upstream | 109852 | 46906850 ~ 46930260 (+) |
| zgc:153184 | LOC106581572 | coding | upstream | 142190 | 46821927 ~ 46897922 (+) |
| LOC110513068 | fam181b | coding | downstream | 33722 | 47074530 ~ 47076721 (+) |
| LOC118944690 | NA | coding | downstream | 441582 | 47482390 ~ 47483034 (+) |
| tenm4 | tenm4 | coding | downstream | 599789 | 47640597 ~ 48319085 (+) |
| nars2 | nars2 | coding | downstream | 1360445 | 48401253 ~ 48458439 (+) |
| gab2 | gab2 | coding | downstream | 1419641 | 48460449 ~ 48624448 (+) |
| G2087731 | NA | non-coding | upstream | 4183 | 47035590 ~ 47035929 (+) |
| prcp | prcp | non-coding | upstream | 4594 | 47020501 ~ 47056921 (+) |
| G2087838 | NA | non-coding | upstream | 96352 | 46942982 ~ 46943760 (+) |
| G2087727 | NA | non-coding | upstream | 102928 | 46936813 ~ 46937184 (+) |
| G2087836 | NA | non-coding | upstream | 121844 | 46917897 ~ 46918268 (+) |
| G2087881 | NA | non-coding | downstream | 23552 | 47064360 ~ 47064591 (+) |
| G2088382 | NA | non-coding | downstream | 36935 | 47077743 ~ 47078349 (+) |
| G2088383 | NA | non-coding | downstream | 38814 | 47079622 ~ 47080068 (+) |
| G2088386 | NA | non-coding | downstream | 39602 | 47080410 ~ 47080683 (+) |
| G2088387 | NA | non-coding | downstream | 41572 | 47082380 ~ 47082589 (+) |
| G2087865 | NA | other | upstream | 11549 | 47027119 ~ 47028563 (+) |
| G2087592 | LOC106592078 | other | upstream | 543225 | 46493922 ~ 46499497 (+) |
| G2087569 | NA | other | upstream | 716418 | 46323084 ~ 46323694 (+) |
| G2087149 | NA | other | upstream | 1241519 | 45797099 ~ 45798593 (+) |
| G2088729 | NA | other | downstream | 484632 | 47525440 ~ 47528548 (+) |
| G2088732 | NA | other | downstream | 491614 | 47532422 ~ 47537945 (+) |
| G2088870 | NA | other | downstream | 813298 | 47854106 ~ 47864829 (+) |
| G2089020 | NA | other | downstream | 1147401 | 48188209 ~ 48191362 (+) |
| G2089124 | NA | other | downstream | 1391670 | 48432478 ~ 48455486 (+) |
