G2088386


Basic Information

Item Value
gene id G2088386
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47080410 ~ 47080683 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2388735
ccgcctctacactctaaccactagactacctgcctcctctacactctaaccactagactacctgcctcctctacactctaaccactaggctaccctgccgcctctatactctaaccactaggctaccctgccgtctctacactctaaccactaggctaccctgccgcctctacactctaaccactgggctaccctgccgcctctacactctaaccactgggctaccctgccgcctctacactctaaccactgggctaccctgccgcctctacac

Function

NR:

description
PREDICTED: formin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2388735 True 274 lncRNA 0.57 1 47080410 47080683

Neighbor

gene id symbol gene type direction distance location
LOC110513068 fam181b coding upstream 3689 47074530 ~ 47076721 (+)
prcp prcp coding upstream 23489 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 77006 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 108379 46971287 ~ 46972031 (+)
guca1c LOC106581568 coding upstream 120631 46946870 ~ 46959779 (+)
LOC118944690 NA coding downstream 401707 47482390 ~ 47483034 (+)
tenm4 tenm4 coding downstream 559914 47640597 ~ 48319085 (+)
nars2 nars2 coding downstream 1320570 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 1379766 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 1552689 48633372 ~ 48774681 (+)
G2088383 NA non-coding upstream 342 47079622 ~ 47080068 (+)
G2088382 NA non-coding upstream 2061 47077743 ~ 47078349 (+)
G2087881 NA non-coding upstream 15819 47064360 ~ 47064591 (+)
G2087869 NA non-coding upstream 39602 47040112 ~ 47040808 (+)
G2087731 NA non-coding upstream 44481 47035590 ~ 47035929 (+)
G2088387 NA non-coding downstream 1697 47082380 ~ 47082589 (+)
G2088444 NA non-coding downstream 125941 47206624 ~ 47207253 (+)
G2088449 NA non-coding downstream 131739 47212422 ~ 47214531 (+)
G2088455 NA non-coding downstream 140892 47221575 ~ 47223159 (+)
G2088458 NA non-coding downstream 143605 47224288 ~ 47228255 (+)
G2087865 NA other upstream 51847 47027119 ~ 47028563 (+)
G2087592 LOC106592078 other upstream 583523 46493922 ~ 46499497 (+)
G2087569 NA other upstream 756716 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1281817 45797099 ~ 45798593 (+)
G2088729 NA other downstream 444757 47525440 ~ 47528548 (+)
G2088732 NA other downstream 451739 47532422 ~ 47537945 (+)
G2088870 NA other downstream 773423 47854106 ~ 47864829 (+)
G2089020 NA other downstream 1107526 48188209 ~ 48191362 (+)
G2089124 NA other downstream 1351795 48432478 ~ 48455486 (+)

Expression


Co-expression Network