G2088449


Basic Information

Item Value
gene id G2088449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47212422 ~ 47214531 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2388842
GATGAGCAGCAACTTTATTGAGTCAGAATGAGGCAGAAGGTTAGCGTAGCAGCAGGTTTATTGAGTCAGATTGAGTCAGAAGGTTAGCGTAGCAGCAGGTATATTGAGTCAGATTGAGTCAGAAGGTTAGCGTAGCAGCAGGTTTATTGAGTCAGATTGAGTCAGGTTAGCGTAGCAGCAGGTATATTGAGTCAGATTGAGTCAGAAGGTTAGCATAGCAGCAGGTATATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2388842 True 232 lncRNA 0.44 5 47212422 47214531

Neighbor

gene id symbol gene type direction distance location
LOC110513068 fam181b coding upstream 135701 47074530 ~ 47076721 (+)
prcp prcp coding upstream 155501 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 209018 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 240391 46971287 ~ 46972031 (+)
guca1c LOC106581568 coding upstream 252643 46946870 ~ 46959779 (+)
LOC118944690 NA coding downstream 267859 47482390 ~ 47483034 (+)
tenm4 tenm4 coding downstream 426066 47640597 ~ 48319085 (+)
nars2 nars2 coding downstream 1186722 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 1245918 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 1418841 48633372 ~ 48774681 (+)
G2088444 NA non-coding upstream 5169 47206624 ~ 47207253 (+)
G2088387 NA non-coding upstream 129833 47082380 ~ 47082589 (+)
G2088386 NA non-coding upstream 131739 47080410 ~ 47080683 (+)
G2088383 NA non-coding upstream 132354 47079622 ~ 47080068 (+)
G2088382 NA non-coding upstream 134073 47077743 ~ 47078349 (+)
G2088455 NA non-coding downstream 7044 47221575 ~ 47223159 (+)
G2088458 NA non-coding downstream 9757 47224288 ~ 47228255 (+)
G2088460 NA non-coding downstream 16466 47230997 ~ 47233060 (+)
G2088576 NA non-coding downstream 86579 47301110 ~ 47301322 (+)
G2088579 NA non-coding downstream 89805 47304336 ~ 47304614 (+)
G2087865 NA other upstream 183859 47027119 ~ 47028563 (+)
G2087592 LOC106592078 other upstream 715535 46493922 ~ 46499497 (+)
G2087569 NA other upstream 888728 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1413829 45797099 ~ 45798593 (+)
G2088729 NA other downstream 310909 47525440 ~ 47528548 (+)
G2088732 NA other downstream 317891 47532422 ~ 47537945 (+)
G2088870 NA other downstream 639575 47854106 ~ 47864829 (+)
G2089020 NA other downstream 973678 48188209 ~ 48191362 (+)
G2089124 NA other downstream 1217947 48432478 ~ 48455486 (+)

Expression


Co-expression Network