G2088455


Basic Information

Item Value
gene id G2088455
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47221575 ~ 47223159 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2388848
ctggttaaataaaggtgttctcaactagcccacctggttaaataaaggtgttctcaactagcctacctggttaaataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaactagccttcctggttaaataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaactggcctacctggttatataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaactagcctacc

Function

NR:

description
PREDICTED: solute carrier organic anion transporter family member 5A1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2388848 True 265 lncRNA 0.42 2 47221575 47223159

Neighbor

gene id symbol gene type direction distance location
LOC110513068 fam181b coding upstream 144854 47074530 ~ 47076721 (+)
prcp prcp coding upstream 164654 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 218171 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 249544 46971287 ~ 46972031 (+)
guca1c LOC106581568 coding upstream 261796 46946870 ~ 46959779 (+)
LOC118944690 NA coding downstream 259231 47482390 ~ 47483034 (+)
tenm4 tenm4 coding downstream 417438 47640597 ~ 48319085 (+)
nars2 nars2 coding downstream 1178094 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 1237290 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 1410213 48633372 ~ 48774681 (+)
G2088449 NA non-coding upstream 7044 47212422 ~ 47214531 (+)
G2088444 NA non-coding upstream 14322 47206624 ~ 47207253 (+)
G2088387 NA non-coding upstream 138986 47082380 ~ 47082589 (+)
G2088386 NA non-coding upstream 140892 47080410 ~ 47080683 (+)
G2088383 NA non-coding upstream 141507 47079622 ~ 47080068 (+)
G2088458 NA non-coding downstream 1129 47224288 ~ 47228255 (+)
G2088460 NA non-coding downstream 7838 47230997 ~ 47233060 (+)
G2088576 NA non-coding downstream 77951 47301110 ~ 47301322 (+)
G2088579 NA non-coding downstream 81177 47304336 ~ 47304614 (+)
G2088591 NA non-coding downstream 109308 47332467 ~ 47332693 (+)
G2087865 NA other upstream 193012 47027119 ~ 47028563 (+)
G2087592 LOC106592078 other upstream 724688 46493922 ~ 46499497 (+)
G2087569 NA other upstream 897881 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1422982 45797099 ~ 45798593 (+)
G2088729 NA other downstream 302281 47525440 ~ 47528548 (+)
G2088732 NA other downstream 309263 47532422 ~ 47537945 (+)
G2088870 NA other downstream 630947 47854106 ~ 47864829 (+)
G2089020 NA other downstream 965050 48188209 ~ 48191362 (+)
G2089124 NA other downstream 1209319 48432478 ~ 48455486 (+)

Expression


Co-expression Network