G2088458


Basic Information

Item Value
gene id G2088458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47224288 ~ 47228255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2388853
aataaaggtgttctcatctagcctacctggttaaataaaggtgttctcaactggcctacctggttatataaaggtgttctcaactagcctacctggttatataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaactagcctacctggttatataaaggtgttctcaactagcctacctggttaaataaaggtgttctcaactagcctacctggttaaataaaggtgttctcaactagcctacctggttaaataaaggtgttctcaactagcctacctcgttaaataaaggtgttctcaactagcctacctggttaaataaaggtgttctcaactagcctacctggttaaataaagg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592871

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2388853 True 371 lncRNA 0.40 2 47224288 47228255

Neighbor

gene id symbol gene type direction distance location
LOC110513068 fam181b coding upstream 147567 47074530 ~ 47076721 (+)
prcp prcp coding upstream 167367 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 220884 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 252257 46971287 ~ 46972031 (+)
guca1c LOC106581568 coding upstream 264509 46946870 ~ 46959779 (+)
LOC118944690 NA coding downstream 254135 47482390 ~ 47483034 (+)
tenm4 tenm4 coding downstream 412342 47640597 ~ 48319085 (+)
nars2 nars2 coding downstream 1172998 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 1232194 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 1405117 48633372 ~ 48774681 (+)
G2088455 NA non-coding upstream 1129 47221575 ~ 47223159 (+)
G2088449 NA non-coding upstream 9757 47212422 ~ 47214531 (+)
G2088444 NA non-coding upstream 17035 47206624 ~ 47207253 (+)
G2088387 NA non-coding upstream 141699 47082380 ~ 47082589 (+)
G2088386 NA non-coding upstream 143605 47080410 ~ 47080683 (+)
G2088460 NA non-coding downstream 2742 47230997 ~ 47233060 (+)
G2088576 NA non-coding downstream 72855 47301110 ~ 47301322 (+)
G2088579 NA non-coding downstream 76081 47304336 ~ 47304614 (+)
G2088591 NA non-coding downstream 104212 47332467 ~ 47332693 (+)
G2088648 NA non-coding downstream 167919 47396174 ~ 47398464 (+)
G2087865 NA other upstream 195725 47027119 ~ 47028563 (+)
G2087592 LOC106592078 other upstream 727401 46493922 ~ 46499497 (+)
G2087569 NA other upstream 900594 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1425695 45797099 ~ 45798593 (+)
G2088729 NA other downstream 297185 47525440 ~ 47528548 (+)
G2088732 NA other downstream 304167 47532422 ~ 47537945 (+)
G2088870 NA other downstream 625851 47854106 ~ 47864829 (+)
G2089020 NA other downstream 959954 48188209 ~ 48191362 (+)
G2089124 NA other downstream 1204223 48432478 ~ 48455486 (+)

Expression


Co-expression Network