G2088690


Basic Information

Item Value
gene id G2088690
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47441800 ~ 47442310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389115
atacagacacctgttagtcaggctgattgaggtagtatgtacatgtagctatatacagacacctgttagtcaggctgattgaggtagtatgtacatgtagctatatacagacacctgttagtcaggctgattgaggtagtatgtacatgtaggtatatacagacacctgttagtcaggctgattgaggtagtatgtacatgtaggtatatacagacacctgttagtcaggctgattgaggtagtatgtacatgtaggtatatacagacacctgttagtcaggctgattgaggtagtatgtacatgtagctatatacagacacctgttagtcaggctgattgaggtagtatgtaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389115 True 355 lncRNA 0.41 2 47441800 47442310

Neighbor

gene id symbol gene type direction distance location
LOC110513068 fam181b coding upstream 365079 47074530 ~ 47076721 (+)
prcp prcp coding upstream 384879 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 438396 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 469769 46971287 ~ 46972031 (+)
guca1c LOC106581568 coding upstream 482021 46946870 ~ 46959779 (+)
LOC118944690 NA coding downstream 40080 47482390 ~ 47483034 (+)
tenm4 tenm4 coding downstream 198287 47640597 ~ 48319085 (+)
nars2 nars2 coding downstream 958943 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 1018139 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 1191062 48633372 ~ 48774681 (+)
G2088683 NA non-coding upstream 11490 47430102 ~ 47430310 (+)
G2088682 NA non-coding upstream 12490 47429101 ~ 47429310 (+)
G2088666 NA non-coding upstream 27969 47413511 ~ 47413831 (+)
G2088656 NA non-coding upstream 38296 47403217 ~ 47403504 (+)
G2088653 NA non-coding upstream 40404 47399631 ~ 47401396 (+)
G2088697 NA non-coding downstream 5996 47448306 ~ 47448635 (+)
G2088703 NA non-coding downstream 14868 47457178 ~ 47457510 (+)
G2088707 NA non-coding downstream 19705 47462015 ~ 47462446 (+)
G2088709 NA non-coding downstream 32114 47474424 ~ 47474790 (+)
G2088713 NA non-coding downstream 44504 47486814 ~ 47487849 (+)
G2087865 NA other upstream 413237 47027119 ~ 47028563 (+)
G2087592 LOC106592078 other upstream 944913 46493922 ~ 46499497 (+)
G2087569 NA other upstream 1118106 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1643207 45797099 ~ 45798593 (+)
G2088729 NA other downstream 83130 47525440 ~ 47528548 (+)
G2088732 NA other downstream 90112 47532422 ~ 47537945 (+)
G2088870 NA other downstream 411796 47854106 ~ 47864829 (+)
G2089020 NA other downstream 745899 48188209 ~ 48191362 (+)
G2089124 NA other downstream 990168 48432478 ~ 48455486 (+)

Expression


Co-expression Network