G2088703


Basic Information

Item Value
gene id G2088703
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47457178 ~ 47457510 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389129
ATCACTAATCACCAGTCCTCTACCATCACTAATCACCTGTCCTCTACCATCACTAATCAACCGTCCTCTACCATCACTAATCACCAGTCCTCTACCATCACTAATCAACCGTCCTCTACCATCACTAATCACCAATCCTCTACCATCACTAATCACCAGTCCTCTACCATCACTAATCACCTGTCCTCTACCATCACTAATCAACCGTCCTCTACCATCACTAATCACCAGTCCTCTAC

Function

NR:

description
PREDICTED: extensin-1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389129 True 239 lncRNA 0.45 2 47457178 47457510

Neighbor

gene id symbol gene type direction distance location
LOC110513068 fam181b coding upstream 380457 47074530 ~ 47076721 (+)
prcp prcp coding upstream 400257 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 453774 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 485147 46971287 ~ 46972031 (+)
guca1c LOC106581568 coding upstream 497399 46946870 ~ 46959779 (+)
LOC118944690 NA coding downstream 24880 47482390 ~ 47483034 (+)
tenm4 tenm4 coding downstream 183087 47640597 ~ 48319085 (+)
nars2 nars2 coding downstream 943743 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 1002939 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 1175862 48633372 ~ 48774681 (+)
G2088697 NA non-coding upstream 8543 47448306 ~ 47448635 (+)
G2088690 NA non-coding upstream 14868 47441800 ~ 47442310 (+)
G2088683 NA non-coding upstream 26868 47430102 ~ 47430310 (+)
G2088682 NA non-coding upstream 27868 47429101 ~ 47429310 (+)
G2088666 NA non-coding upstream 43347 47413511 ~ 47413831 (+)
G2088707 NA non-coding downstream 4505 47462015 ~ 47462446 (+)
G2088709 NA non-coding downstream 16914 47474424 ~ 47474790 (+)
G2088713 NA non-coding downstream 29304 47486814 ~ 47487849 (+)
G2088745 NA non-coding downstream 123872 47581382 ~ 47635302 (+)
G2088752 NA non-coding downstream 132414 47589924 ~ 47590226 (+)
G2087865 NA other upstream 428615 47027119 ~ 47028563 (+)
G2087592 LOC106592078 other upstream 960291 46493922 ~ 46499497 (+)
G2087569 NA other upstream 1133484 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1658585 45797099 ~ 45798593 (+)
G2088729 NA other downstream 67930 47525440 ~ 47528548 (+)
G2088732 NA other downstream 74912 47532422 ~ 47537945 (+)
G2088870 NA other downstream 396596 47854106 ~ 47864829 (+)
G2089020 NA other downstream 730699 48188209 ~ 48191362 (+)
G2089124 NA other downstream 974968 48432478 ~ 48455486 (+)

Expression


Co-expression Network