G2088745


Basic Information

Item Value
gene id G2088745
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47581382 ~ 47635302 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389190
aagagacagaggcatagggtgcactatatagggcatagggtgcactatatagggaatagggtgcactatatagggaatagggtgcactatatagggaatagggtgctctatatagggaatagggtgcactatatagggaatagggtgcactatatagggaatagggtgcactatatagggaatagggtgcactatatagggaatagggtgcactatatagggaatagggtgcactatatagggaatagggtgcactatatagagaatagggtgccctatatagggaatagggtgcaatatatagggaatagggtgcactatatagggaatagtgtgcgctatatagggaatagggtgcactatatagggaatagggtgcactatatagggaatagggtgcactatatagggaatagggtgcactacatagggaataggg

Function

NR:

description
PREDICTED: NADH-ubiquinone oxidoreductase chain 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389190 True 439 lncRNA 0.44 3 47581382 47635302

Neighbor

gene id symbol gene type direction distance location
LOC118944690 NA coding upstream 98348 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 504661 47074530 ~ 47076721 (+)
prcp prcp coding upstream 524461 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 577978 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 609351 46971287 ~ 46972031 (+)
tenm4 tenm4 coding downstream 5295 47640597 ~ 48319085 (+)
nars2 nars2 coding downstream 765951 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 825147 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 998070 48633372 ~ 48774681 (+)
trpc6b LOC106581586 coding downstream 1454581 49089883 ~ 49186113 (+)
G2088713 NA non-coding upstream 93533 47486814 ~ 47487849 (+)
G2088709 NA non-coding upstream 106592 47474424 ~ 47474790 (+)
G2088707 NA non-coding upstream 118936 47462015 ~ 47462446 (+)
G2088703 NA non-coding upstream 123872 47457178 ~ 47457510 (+)
G2088697 NA non-coding upstream 132747 47448306 ~ 47448635 (+)
G2088781 NA non-coding downstream 17059 47652361 ~ 47655801 (+)
G2088779 NA non-coding downstream 18076 47653378 ~ 47654856 (+)
G2088793 NA non-coding downstream 50652 47685954 ~ 47686325 (+)
G2088804 NA non-coding downstream 77008 47712310 ~ 47714080 (+)
G2088823 NA non-coding downstream 111887 47747189 ~ 47747580 (+)
G2088732 NA other upstream 43437 47532422 ~ 47537945 (+)
G2088729 NA other upstream 52834 47525440 ~ 47528548 (+)
G2087865 NA other upstream 552819 47027119 ~ 47028563 (+)
G2087592 LOC106592078 other upstream 1084495 46493922 ~ 46499497 (+)
G2088870 NA other downstream 218804 47854106 ~ 47864829 (+)
G2089020 NA other downstream 552907 48188209 ~ 48191362 (+)
G2089124 NA other downstream 797176 48432478 ~ 48455486 (+)
G2089906 NA other downstream 1291673 48926975 ~ 48927292 (+)
G2089935 NA other downstream 1422703 49058005 ~ 49058895 (+)

Expression


Co-expression Network