G2088793


Basic Information

Item Value
gene id G2088793
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47685954 ~ 47686325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389252
ATTAATAAGAGGGGCGGGGTTATTTCCATGTTTGGAGTGTCAAGGTGATCAAATCTTCTGgggaggctttccactagatgttggaacattgctgctataacagcctccactcttctgggaaggctttccactagatgttggaacgttgctgctataacagcctccactcttctgggaaggctttccactagatgttggaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389252 True 201 lncRNA 0.47 2 47685954 47686325

Neighbor

gene id symbol gene type direction distance location
LOC118944690 NA coding upstream 202920 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 609233 47074530 ~ 47076721 (+)
prcp prcp coding upstream 629033 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 682550 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 713923 46971287 ~ 46972031 (+)
nars2 nars2 coding downstream 714928 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 774124 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 947047 48633372 ~ 48774681 (+)
trpc6b LOC106581586 coding downstream 1403558 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 1515123 49201448 ~ 49266635 (+)
G2088753 NA non-coding upstream 27089 47593766 ~ 47658865 (+)
G2088781 NA non-coding upstream 30153 47652361 ~ 47655801 (+)
G2088779 NA non-coding upstream 31098 47653378 ~ 47654856 (+)
G2088745 NA non-coding upstream 50652 47581382 ~ 47635302 (+)
G2088761 NA non-coding upstream 78860 47606534 ~ 47607094 (+)
G2088804 NA non-coding downstream 25985 47712310 ~ 47714080 (+)
G2088823 NA non-coding downstream 60864 47747189 ~ 47747580 (+)
G2088848 NA non-coding downstream 115479 47801804 ~ 47802629 (+)
G2088860 NA non-coding downstream 153912 47840237 ~ 47840751 (+)
G2088880 NA non-coding downstream 191173 47877498 ~ 47880284 (+)
G2088732 NA other upstream 148009 47532422 ~ 47537945 (+)
G2088729 NA other upstream 157406 47525440 ~ 47528548 (+)
G2087865 NA other upstream 657391 47027119 ~ 47028563 (+)
G2087592 LOC106592078 other upstream 1189067 46493922 ~ 46499497 (+)
G2088870 NA other downstream 167781 47854106 ~ 47864829 (+)
G2089020 NA other downstream 501884 48188209 ~ 48191362 (+)
G2089124 NA other downstream 746153 48432478 ~ 48455486 (+)
G2089906 NA other downstream 1240650 48926975 ~ 48927292 (+)
G2089935 NA other downstream 1371680 49058005 ~ 49058895 (+)

Expression


Co-expression Network