G2088901


Basic Information

Item Value
gene id G2088901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47910036 ~ 47911233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389389
cactaggctgcctgcctcctctaaccactaggctacatgcctcctctaaccactagactacctgtctcctccaaccactaggctacctgtctcctttaaactctaaccactaggctacctacctcctctacactctaaccactaggctacctacctcctctaaccactaggctacctgtctcctctaaccactaggctacctgcctcctctaaccactaggctacctgtctcctctaaccactaggctacctgtctcctctaaccactaggctacctgtctcctctaaccactaggctgcctgcctcctctaaccactaggctacatgcctcctctaaccactagactacctgtctcctccaaccactaggctacctgtctcctttaaactcgaaccactaggctacctacctcctctacactctaaccactaggctacctacctcctctaaccactaggctacctgtctcctctaaccactaggctacctgcctcctctaaccactaggctacctgtctcctctaaccactaggctacctgcctcctctaaccactaggctgcctgcctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389389 True 572 lncRNA 0.53 3 47910036 47911233

Neighbor

gene id symbol gene type direction distance location
LOC118944690 NA coding upstream 427002 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 833315 47074530 ~ 47076721 (+)
prcp prcp coding upstream 853115 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 906632 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 938005 46971287 ~ 46972031 (+)
nars2 nars2 coding downstream 490020 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 549216 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 722139 48633372 ~ 48774681 (+)
trpc6b LOC106581586 coding downstream 1178650 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 1290215 49201448 ~ 49266635 (+)
G2088880 NA non-coding upstream 29752 47877498 ~ 47880284 (+)
G2088860 NA non-coding upstream 69285 47840237 ~ 47840751 (+)
G2088848 NA non-coding upstream 107407 47801804 ~ 47802629 (+)
G2088823 NA non-coding upstream 162456 47747189 ~ 47747580 (+)
G2088804 NA non-coding upstream 195956 47712310 ~ 47714080 (+)
G2088905 NA non-coding downstream 5125 47916358 ~ 47916670 (+)
G2088912 NA non-coding downstream 21025 47932258 ~ 47932627 (+)
G2088913 NA non-coding downstream 24251 47935484 ~ 47935821 (+)
G2088939 NA non-coding downstream 103615 48014848 ~ 48015348 (+)
G2088946 NA non-coding downstream 115088 48026321 ~ 48026972 (+)
G2088870 NA other upstream 45207 47854106 ~ 47864829 (+)
G2088732 NA other upstream 372091 47532422 ~ 47537945 (+)
G2088729 NA other upstream 381488 47525440 ~ 47528548 (+)
G2087865 NA other upstream 881473 47027119 ~ 47028563 (+)
G2089020 NA other downstream 276976 48188209 ~ 48191362 (+)
G2089124 NA other downstream 521245 48432478 ~ 48455486 (+)
G2089906 NA other downstream 1015742 48926975 ~ 48927292 (+)
G2089935 NA other downstream 1146772 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 1401510 49312743 ~ 49316226 (+)

Expression


Co-expression Network