G2088939


Basic Information

Item Value
gene id G2088939
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48014848 ~ 48015348 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389431
gtatataatcaggacaggtattgtatatgtaatcaggacaggtattgtatatgtaatcaggacaggtattgtatatgtaatcaggacaggtattgtataaggacaggtattgtatataccatcaggacaggtattgtatatataatcaggacaggtattgtatatgtaatcaggacaggtattgtataaggacaggtattgtatatgtaatcaggac

Function

NR:

description
PREDICTED: dystrophin-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389431 True 217 lncRNA 0.34 2 48014848 48015348

Neighbor

gene id symbol gene type direction distance location
LOC118944690 NA coding upstream 531814 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 938127 47074530 ~ 47076721 (+)
prcp prcp coding upstream 957927 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 1011444 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 1042817 46971287 ~ 46972031 (+)
nars2 nars2 coding downstream 385905 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 445101 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 618024 48633372 ~ 48774681 (+)
trpc6b LOC106581586 coding downstream 1074535 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 1186100 49201448 ~ 49266635 (+)
G2088913 NA non-coding upstream 79027 47935484 ~ 47935821 (+)
G2088912 NA non-coding upstream 82221 47932258 ~ 47932627 (+)
G2088905 NA non-coding upstream 98178 47916358 ~ 47916670 (+)
G2088901 NA non-coding upstream 103615 47910036 ~ 47911233 (+)
G2088880 NA non-coding upstream 134564 47877498 ~ 47880284 (+)
G2088946 NA non-coding downstream 10973 48026321 ~ 48026972 (+)
G2088972 NA non-coding downstream 52575 48067923 ~ 48068257 (+)
G2088994 NA non-coding downstream 97312 48112660 ~ 48113241 (+)
G2089007 NA non-coding downstream 130092 48145440 ~ 48146026 (+)
G2089021 NA non-coding downstream 174269 48189617 ~ 48189955 (+)
G2088870 NA other upstream 150019 47854106 ~ 47864829 (+)
G2088732 NA other upstream 476903 47532422 ~ 47537945 (+)
G2088729 NA other upstream 486300 47525440 ~ 47528548 (+)
G2087865 NA other upstream 986285 47027119 ~ 47028563 (+)
G2089020 NA other downstream 172861 48188209 ~ 48191362 (+)
G2089124 NA other downstream 417130 48432478 ~ 48455486 (+)
G2089906 NA other downstream 911627 48926975 ~ 48927292 (+)
G2089935 NA other downstream 1042657 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 1297395 49312743 ~ 49316226 (+)

Expression


Co-expression Network