Gene
RNA
| Item | Value |
|---|---|
| gene id | G2088946 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 48026321 ~ 48026972 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: amphiphysin isoform X9 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2389439 | True | 490 | lncRNA | 0.43 | 2 | 48026321 | 48026972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944690 | NA | coding | upstream | 543287 | 47482390 ~ 47483034 (+) |
| LOC110513068 | fam181b | coding | upstream | 949600 | 47074530 ~ 47076721 (+) |
| prcp | prcp | coding | upstream | 969400 | 47020501 ~ 47056921 (+) |
| rab30 | rab30 | coding | upstream | 1022917 | 46978103 ~ 47003404 (+) |
| LOC110508116 | thrsp | coding | upstream | 1054290 | 46971287 ~ 46972031 (+) |
| nars2 | nars2 | coding | downstream | 374281 | 48401253 ~ 48458439 (+) |
| gab2 | gab2 | coding | downstream | 433477 | 48460449 ~ 48624448 (+) |
| zmp:0000001236 | LOC106581583 | coding | downstream | 606400 | 48633372 ~ 48774681 (+) |
| trpc6b | LOC106581586 | coding | downstream | 1062911 | 49089883 ~ 49186113 (+) |
| pgr | LOC100846969 | coding | downstream | 1174476 | 49201448 ~ 49266635 (+) |
| G2088939 | NA | non-coding | upstream | 10973 | 48014848 ~ 48015348 (+) |
| G2088913 | NA | non-coding | upstream | 90500 | 47935484 ~ 47935821 (+) |
| G2088912 | NA | non-coding | upstream | 93694 | 47932258 ~ 47932627 (+) |
| G2088905 | NA | non-coding | upstream | 109651 | 47916358 ~ 47916670 (+) |
| G2088901 | NA | non-coding | upstream | 115088 | 47910036 ~ 47911233 (+) |
| G2088972 | NA | non-coding | downstream | 40951 | 48067923 ~ 48068257 (+) |
| G2088994 | NA | non-coding | downstream | 85688 | 48112660 ~ 48113241 (+) |
| G2089007 | NA | non-coding | downstream | 118468 | 48145440 ~ 48146026 (+) |
| G2089021 | NA | non-coding | downstream | 162645 | 48189617 ~ 48189955 (+) |
| G2089027 | NA | non-coding | downstream | 183922 | 48210894 ~ 48211664 (+) |
| G2088870 | NA | other | upstream | 161492 | 47854106 ~ 47864829 (+) |
| G2088732 | NA | other | upstream | 488376 | 47532422 ~ 47537945 (+) |
| G2088729 | NA | other | upstream | 497773 | 47525440 ~ 47528548 (+) |
| G2087865 | NA | other | upstream | 997758 | 47027119 ~ 47028563 (+) |
| G2089020 | NA | other | downstream | 161237 | 48188209 ~ 48191362 (+) |
| G2089124 | NA | other | downstream | 405506 | 48432478 ~ 48455486 (+) |
| G2089906 | NA | other | downstream | 900003 | 48926975 ~ 48927292 (+) |
| G2089935 | NA | other | downstream | 1031033 | 49058005 ~ 49058895 (+) |
| G2090091 | LOC106581584 | other | downstream | 1285771 | 49312743 ~ 49316226 (+) |
