G2089029


Basic Information

Item Value
gene id G2089029
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48214038 ~ 48214336 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389541
gtaaagggtctgaatactcatgtaaatgtgatatttcagtttttatttgtaacaaattagcaaaaatgtattgtcattatggggaattgtgaaTTGTGACCTACAGAGGTGGTATAGTAATGTACTTCCTGAGTGACTTACAGAGGTGGTATAGTAATGTACTTCCTGAGTGACCTACAGAGGTGTTATAGTAATGTACTTCCTGAGTGACCTACAGAGGTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389541 True 225 lncRNA 0.36 2 48214038 48214336

Neighbor

gene id symbol gene type direction distance location
LOC118944690 NA coding upstream 731004 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 1137317 47074530 ~ 47076721 (+)
prcp prcp coding upstream 1157117 47020501 ~ 47056921 (+)
rab30 rab30 coding upstream 1210634 46978103 ~ 47003404 (+)
LOC110508116 thrsp coding upstream 1242007 46971287 ~ 46972031 (+)
nars2 nars2 coding downstream 186917 48401253 ~ 48458439 (+)
gab2 gab2 coding downstream 246113 48460449 ~ 48624448 (+)
zmp:0000001236 LOC106581583 coding downstream 419036 48633372 ~ 48774681 (+)
trpc6b LOC106581586 coding downstream 875547 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 987112 49201448 ~ 49266635 (+)
G2089027 NA non-coding upstream 2374 48210894 ~ 48211664 (+)
G2089021 NA non-coding upstream 24083 48189617 ~ 48189955 (+)
G2089007 NA non-coding upstream 68012 48145440 ~ 48146026 (+)
G2088994 NA non-coding upstream 100797 48112660 ~ 48113241 (+)
G2088972 NA non-coding upstream 145781 48067923 ~ 48068257 (+)
G2089043 NA non-coding downstream 18285 48232621 ~ 48234037 (+)
G2089045 NA non-coding downstream 18707 48233043 ~ 48235002 (+)
G2089046 NA non-coding downstream 22862 48237198 ~ 48238048 (+)
G2089081 NA non-coding downstream 102920 48317256 ~ 48317502 (+)
G2089096 NA non-coding downstream 144326 48358662 ~ 48359011 (+)
G2089020 NA other upstream 22676 48188209 ~ 48191362 (+)
G2088870 NA other upstream 349209 47854106 ~ 47864829 (+)
G2088732 NA other upstream 676093 47532422 ~ 47537945 (+)
G2088729 NA other upstream 685490 47525440 ~ 47528548 (+)
G2089124 NA other downstream 218142 48432478 ~ 48455486 (+)
G2089906 NA other downstream 712639 48926975 ~ 48927292 (+)
G2089935 NA other downstream 843669 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 1098407 49312743 ~ 49316226 (+)
LOC118944717 NA other downstream 1108833 49323013 ~ 49323866 (+)

Expression


Co-expression Network