G2089140


Basic Information

Item Value
gene id G2089140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48469730 ~ 48470815 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389676
AAAAATgtacttttatttaacttggcaattcagttaagaactgACATGATAATTATTTTAAGAATGGCGGCCTACcggggaaacagtgggttaactgccttgttcaggggcagaaagacagatttttaccttgtcagctcggggatttgaacttgcaacctttgggttactagtccaatgctctaaccactgccACCCCACAgtgtagtgcactagggaatataGGGAGCTATTTCATAACCTGACTCATCAGTTAGCTTCATGtatctctcctgttcctctcagtTAGCTTCATGtatctctcctgttctcctcagTTAGCTTCATGtatctcccctgttctcctcagtTAGCTTCATGtatctcccctgttctcctcagtTAGCTTcatgtatctctcctgttctcctcagTTAGCTTCATGtatctcccctgttctcctcagtTAGCTTCATGTATCTATCCTGTTCTCCTCAGTTAGCTTCATGTA
>TU2389677
AAAAATgtacttttatttaacttggcaattcagttaagaactgACATGATAATTATTTTAAGAATGGCGGCCTACcggggaaacagtgggttaactgccttgttcaggggcagaaagacagatttttaccttgtcagctcggggatttgaacttgcaacctttgggttactagtccaatgctctaaccactgccACCCCACAgtgtagtgcactagggaatataGGGAGCTATTTCATAACCTGACTCATCAGTTAGCTTCATGtatctctcctgttcctctcagtTAGCTTCATGtatctctcctgttctcctcagTTAGCTTcatgtatctctcctgttctcctcagTTAGCTTCATGtatctcccctgttctcctcagtTAGCTTCATGTATCTATCCTGTTCTCCTCAGTTAGCTTCATGTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389676 False 490 lncRNA 0.43 2 48469730 48470815
TU2389677 True 426 lncRNA 0.42 2 48469730 48470815

Neighbor

gene id symbol gene type direction distance location
nars2 nars2 coding upstream 11291 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 150645 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 986696 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 1393009 47074530 ~ 47076721 (+)
prcp prcp coding upstream 1412809 47020501 ~ 47056921 (+)
zmp:0000001236 LOC106581583 coding downstream 162557 48633372 ~ 48774681 (+)
trpc6b LOC106581586 coding downstream 619068 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 730633 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 852198 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1995068 50465883 ~ 50476608 (+)
G2089112 NA non-coding upstream 62681 48406817 ~ 48407049 (+)
G2089106 NA non-coding upstream 84376 48383952 ~ 48385354 (+)
G2089096 NA non-coding upstream 110719 48358662 ~ 48359011 (+)
G2089081 NA non-coding upstream 152228 48317256 ~ 48317502 (+)
G2089143 NA non-coding downstream 6295 48477110 ~ 48477900 (+)
G2089144 NA non-coding downstream 7723 48478538 ~ 48479901 (+)
G2089147 NA non-coding downstream 16910 48487725 ~ 48488801 (+)
G2089153 NA non-coding downstream 23120 48493935 ~ 48496506 (+)
G2089154 NA non-coding downstream 30006 48500821 ~ 48501196 (+)
G2089124 NA other upstream 14244 48432478 ~ 48455486 (+)
G2089020 NA other upstream 278368 48188209 ~ 48191362 (+)
G2088870 NA other upstream 604901 47854106 ~ 47864829 (+)
G2088732 NA other upstream 931785 47532422 ~ 47537945 (+)
G2088729 NA other upstream 941182 47525440 ~ 47528548 (+)
G2089906 NA other downstream 456160 48926975 ~ 48927292 (+)
G2089935 NA other downstream 587190 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 841928 49312743 ~ 49316226 (+)
G2090103 NA other downstream 862632 49333447 ~ 49334183 (+)

Expression


Co-expression Network