G2089143


Basic Information

Item Value
gene id G2089143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48477110 ~ 48477900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389684
ctataagaggaacaggagctctacaatactttagatataATATCCTATAAAGAGGAaaaggagctccacaatactttagagataatatcctataagaggaacaggagctctacaatactttagagataatattctataaagaggaacaggagctctacaatactttagatataatattctataaagaggaacaggagctctacaatactttagagataatattctataaagaggaacaggagctctacaatactttagagataatatcctataaagaggaacaggagctctacaatactttagagataatatcatataaagaggaacaggagctctacaatactttagatataatatcctataagaggaacaggagctctacaatacttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389684 True 391 lncRNA 0.32 2 48477110 48477900

Neighbor

gene id symbol gene type direction distance location
nars2 nars2 coding upstream 18671 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 158025 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 994076 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 1400389 47074530 ~ 47076721 (+)
prcp prcp coding upstream 1420189 47020501 ~ 47056921 (+)
zmp:0000001236 LOC106581583 coding downstream 155472 48633372 ~ 48774681 (+)
trpc6b LOC106581586 coding downstream 611983 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 723548 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 845113 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1987983 50465883 ~ 50476608 (+)
G2089140 NA non-coding upstream 6295 48469730 ~ 48470815 (+)
G2089112 NA non-coding upstream 70061 48406817 ~ 48407049 (+)
G2089106 NA non-coding upstream 91756 48383952 ~ 48385354 (+)
G2089096 NA non-coding upstream 118099 48358662 ~ 48359011 (+)
G2089144 NA non-coding downstream 638 48478538 ~ 48479901 (+)
G2089147 NA non-coding downstream 9825 48487725 ~ 48488801 (+)
G2089153 NA non-coding downstream 16035 48493935 ~ 48496506 (+)
G2089154 NA non-coding downstream 22921 48500821 ~ 48501196 (+)
G2089165 NA non-coding downstream 43006 48520906 ~ 48521204 (+)
G2089124 NA other upstream 21624 48432478 ~ 48455486 (+)
G2089020 NA other upstream 285748 48188209 ~ 48191362 (+)
G2088870 NA other upstream 612281 47854106 ~ 47864829 (+)
G2088732 NA other upstream 939165 47532422 ~ 47537945 (+)
G2088729 NA other upstream 948562 47525440 ~ 47528548 (+)
G2089906 NA other downstream 449075 48926975 ~ 48927292 (+)
G2089935 NA other downstream 580105 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 834843 49312743 ~ 49316226 (+)
G2090103 NA other downstream 855547 49333447 ~ 49334183 (+)

Expression


Co-expression Network