G2089207


Basic Information

Item Value
gene id G2089207
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48618499 ~ 48618907 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389767
GAAAAACAGTACCCTCCACAGGGCAATGTcctcaatcactgccctgggacattgggatattttttttagaccagaggaaagagtgcctcctactggccctccaacaccacttccagcagcatctggtctcccatccagggactgaccaggaccaacccttcttagcttcagaagcaagccagcagtagtatgcagggtggtaatgctgctgaccaggaccaaccctgcttagcttcagaagcaagccagcagtggtatgcagggtggtatgctggtaGAGAACAGAAGAAGAAGTGGACGAATAAACACACTCATTCAGGAACAAGTGTATGCATTTGAAAGG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389767 True 343 lncRNA 0.50 2 48618499 48618907

Neighbor

gene id symbol gene type direction distance location
nars2 nars2 coding upstream 160060 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 299414 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 1135465 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 1541778 47074530 ~ 47076721 (+)
prcp prcp coding upstream 1561578 47020501 ~ 47056921 (+)
zmp:0000001236 LOC106581583 coding downstream 14465 48633372 ~ 48774681 (+)
trpc6b LOC106581586 coding downstream 470976 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 582541 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 704106 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1846976 50465883 ~ 50476608 (+)
G2089204 NA non-coding upstream 1030 48615267 ~ 48617469 (+)
G2089205 NA non-coding upstream 1776 48614439 ~ 48616723 (+)
G2089200 NA non-coding upstream 17711 48600374 ~ 48600788 (+)
G2089190 NA non-coding upstream 39495 48577968 ~ 48579004 (+)
G2089174 NA non-coding upstream 72500 48544446 ~ 48545999 (+)
G2089208 NA non-coding downstream 1038 48619945 ~ 48620450 (+)
G2089220 NA non-coding downstream 33445 48652352 ~ 48652935 (+)
G2089243 NA non-coding downstream 64782 48683689 ~ 48684256 (+)
G2089244 NA non-coding downstream 65636 48684543 ~ 48686439 (+)
G2089258 NA non-coding downstream 96682 48715589 ~ 48716164 (+)
G2089124 NA other upstream 163013 48432478 ~ 48455486 (+)
G2089020 NA other upstream 427137 48188209 ~ 48191362 (+)
G2088870 NA other upstream 753670 47854106 ~ 47864829 (+)
G2088732 NA other upstream 1080554 47532422 ~ 47537945 (+)
G2088729 NA other upstream 1089951 47525440 ~ 47528548 (+)
G2089906 NA other downstream 308068 48926975 ~ 48927292 (+)
G2089935 NA other downstream 439098 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 693836 49312743 ~ 49316226 (+)
G2090103 NA other downstream 714540 49333447 ~ 49334183 (+)

Expression


Co-expression Network