Gene
RNA
| Item | Value |
|---|---|
| gene id | G2089220 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 48652352 ~ 48652935 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2389782 | True | 335 | lncRNA | 0.38 | 2 | 48652352 | 48652935 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gab2 | gab2 | coding | upstream | 27904 | 48460449 ~ 48624448 (+) |
| nars2 | nars2 | coding | upstream | 193913 | 48401253 ~ 48458439 (+) |
| tenm4 | tenm4 | coding | upstream | 333267 | 47640597 ~ 48319085 (+) |
| LOC118944690 | NA | coding | upstream | 1169318 | 47482390 ~ 47483034 (+) |
| LOC110513068 | fam181b | coding | upstream | 1575631 | 47074530 ~ 47076721 (+) |
| trpc6b | LOC106581586 | coding | downstream | 436948 | 49089883 ~ 49186113 (+) |
| pgr | LOC100846969 | coding | downstream | 548513 | 49201448 ~ 49266635 (+) |
| LOC118944717 | NA | coding | downstream | 670078 | 49323013 ~ 49323866 (+) |
| LOC110508133 | fbxo40 | coding | downstream | 1812948 | 50465883 ~ 50476608 (+) |
| LOC110507254 | nectin1 | coding | downstream | 2012784 | 50665719 ~ 50850459 (+) |
| G2089208 | NA | non-coding | upstream | 31902 | 48619945 ~ 48620450 (+) |
| G2089207 | NA | non-coding | upstream | 33445 | 48618499 ~ 48618907 (+) |
| G2089204 | NA | non-coding | upstream | 34883 | 48615267 ~ 48617469 (+) |
| G2089205 | NA | non-coding | upstream | 35629 | 48614439 ~ 48616723 (+) |
| G2089200 | NA | non-coding | upstream | 51564 | 48600374 ~ 48600788 (+) |
| G2089243 | NA | non-coding | downstream | 30754 | 48683689 ~ 48684256 (+) |
| G2089244 | NA | non-coding | downstream | 31608 | 48684543 ~ 48686439 (+) |
| G2089258 | NA | non-coding | downstream | 62654 | 48715589 ~ 48716164 (+) |
| G2089260 | NA | non-coding | downstream | 66984 | 48719919 ~ 48720313 (+) |
| G2089261 | NA | non-coding | downstream | 67781 | 48720716 ~ 48721029 (+) |
| G2089124 | NA | other | upstream | 196866 | 48432478 ~ 48455486 (+) |
| G2089020 | NA | other | upstream | 460990 | 48188209 ~ 48191362 (+) |
| G2088870 | NA | other | upstream | 787523 | 47854106 ~ 47864829 (+) |
| G2088732 | NA | other | upstream | 1114407 | 47532422 ~ 47537945 (+) |
| G2088729 | NA | other | upstream | 1123804 | 47525440 ~ 47528548 (+) |
| G2089906 | NA | other | downstream | 274040 | 48926975 ~ 48927292 (+) |
| G2089935 | NA | other | downstream | 405070 | 49058005 ~ 49058895 (+) |
| G2090091 | LOC106581584 | other | downstream | 659808 | 49312743 ~ 49316226 (+) |
| G2090103 | NA | other | downstream | 680512 | 49333447 ~ 49334183 (+) |
