G2089258


Basic Information

Item Value
gene id G2089258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48715589 ~ 48716164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389824
catccaaggaccAGCCGTGCTtccctgttctgagacaattgcaattttccctctttgtggcacctgaccacaccactaaacagtagtccaggtgtgacaaaactagggcctgtaggacctgccttgttggtagtgttgttaagaaggtagaaactagggcctgtaggacctgccttgttgatagtgttgttaagaaggtagaaactagggcctgtaggacctgccttgttgatagtgttgttaagaaggtagaaactagggcctgtaggacctgccttgttgatagtgtttttaagaaggcagagcatcgctttattatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389824 True 321 lncRNA 0.47 2 48715589 48716164

Neighbor

gene id symbol gene type direction distance location
gab2 gab2 coding upstream 91141 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 257150 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 396504 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 1232555 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 1638868 47074530 ~ 47076721 (+)
trpc6b LOC106581586 coding downstream 373719 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 485284 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 606849 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1749719 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1949555 50665719 ~ 50850459 (+)
G2089244 NA non-coding upstream 29150 48684543 ~ 48686439 (+)
G2089243 NA non-coding upstream 31333 48683689 ~ 48684256 (+)
G2089220 NA non-coding upstream 62654 48652352 ~ 48652935 (+)
G2089208 NA non-coding upstream 95139 48619945 ~ 48620450 (+)
G2089207 NA non-coding upstream 96682 48618499 ~ 48618907 (+)
G2089260 NA non-coding downstream 3755 48719919 ~ 48720313 (+)
G2089261 NA non-coding downstream 4552 48720716 ~ 48721029 (+)
G2089274 NA non-coding downstream 29620 48745784 ~ 48748130 (+)
G2089213 NA non-coding downstream 54263 48770427 ~ 48771174 (+)
zmp:0000001236 LOC106581583 non-coding downstream 57900 48633372 ~ 48774681 (+)
G2089124 NA other upstream 260103 48432478 ~ 48455486 (+)
G2089020 NA other upstream 524227 48188209 ~ 48191362 (+)
G2088870 NA other upstream 850760 47854106 ~ 47864829 (+)
G2088732 NA other upstream 1177644 47532422 ~ 47537945 (+)
G2088729 NA other upstream 1187041 47525440 ~ 47528548 (+)
G2089906 NA other downstream 210811 48926975 ~ 48927292 (+)
G2089935 NA other downstream 341841 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 596579 49312743 ~ 49316226 (+)
G2090103 NA other downstream 617283 49333447 ~ 49334183 (+)

Expression


Co-expression Network