G2089274


Basic Information

Item Value
gene id G2089274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48745784 ~ 48748130 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2389844
gctgtttGAAGGGAGTGGTctaaccagagacagagagacaggctgtttGAAGGGAGTGTTCtaactagagacagagagacaggctgtttGAAGGGAGTGTTctaaccagagacagagagacaggctgtgtgaagggaaGGTTCtaactagagacagagagacaggctgtgtgaagggagtggtctaactagagacagagagacaggctgtgtgaagggagggttctaaccagagacagagagacaggctgtgtgaagggagtggtctaactagagacagagagacaggctgtttGAAGGGAGTGGTCTAaccagagaccgagagacaggcTGTTTGAAGGCAGTGTTctaaccagagacagagagacaggctgtgtgaagggaaGGTTCtaactagagacagagagacaggctgtgtgaagggagtggtctaactagagacagagagacaggctgtgtgaagggagtggtctaaccagagacagagagacaggctgtttGAAGGGAGTGTTctaaccagagacagagagacaggctgtgtgaagggaaGGTTCtaactagagacagagagacaggctgtgtgaagggagtggtctaactaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2389844 True 602 lncRNA 0.50 3 48745784 48748130

Neighbor

gene id symbol gene type direction distance location
gab2 gab2 coding upstream 121336 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 287345 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 426699 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 1262750 47482390 ~ 47483034 (+)
LOC110513068 fam181b coding upstream 1669063 47074530 ~ 47076721 (+)
trpc6b LOC106581586 coding downstream 341753 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 453318 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 574883 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1717753 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1917589 50665719 ~ 50850459 (+)
G2089261 NA non-coding upstream 24755 48720716 ~ 48721029 (+)
G2089260 NA non-coding upstream 25471 48719919 ~ 48720313 (+)
G2089258 NA non-coding upstream 29620 48715589 ~ 48716164 (+)
G2089244 NA non-coding upstream 59345 48684543 ~ 48686439 (+)
G2089243 NA non-coding upstream 61528 48683689 ~ 48684256 (+)
G2089213 NA non-coding downstream 22297 48770427 ~ 48771174 (+)
zmp:0000001236 LOC106581583 non-coding downstream 25934 48633372 ~ 48774681 (+)
G2089900 NA non-coding downstream 169128 48917258 ~ 48918081 (+)
G2089902 NA non-coding downstream 174993 48923123 ~ 48923343 (+)
G2089903 NA non-coding downstream 175451 48923581 ~ 48923815 (+)
G2089124 NA other upstream 290298 48432478 ~ 48455486 (+)
G2089020 NA other upstream 554422 48188209 ~ 48191362 (+)
G2088870 NA other upstream 880955 47854106 ~ 47864829 (+)
G2088732 NA other upstream 1207839 47532422 ~ 47537945 (+)
G2088729 NA other upstream 1217236 47525440 ~ 47528548 (+)
G2089906 NA other downstream 178845 48926975 ~ 48927292 (+)
G2089935 NA other downstream 309875 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 564613 49312743 ~ 49316226 (+)
G2090103 NA other downstream 585317 49333447 ~ 49334183 (+)

Expression


Co-expression Network