G2089900


Basic Information

Item Value
gene id G2089900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48917258 ~ 48918081 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390612
AGTCAATACAGACAAAACCGTCAGTATAGTCAACACAGACAACACCGTCAACACAGACAACACCGTCAGTATAGTCAACACAGACAACACCGTCAGTATAGTCAACACAGACAACACCGTCAGTATAGTcaacacagacaacacagtcATCGCAGTCTACATAAACATCAAGGTCAACAAATATATATCACAGTCAGCACAGTAATCACAGTCAACATAGTAATCACAGtcaacacagtaaagacagtcaacacagtaaagacagttaacacagtaaagacagtcaacatagtgatcacagtcaacacagtaaagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390612 True 317 lncRNA 0.40 2 48917258 48918081

Neighbor

gene id symbol gene type direction distance location
zmp:0000001236 LOC106581583 coding upstream 142577 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 292810 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 458819 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 598173 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 1434224 47482390 ~ 47483034 (+)
trpc6b LOC106581586 coding downstream 171802 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 283367 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 404932 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1547802 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1747638 50665719 ~ 50850459 (+)
G2089213 NA non-coding upstream 146084 48770427 ~ 48771174 (+)
G2089274 NA non-coding upstream 169128 48745784 ~ 48748130 (+)
G2089261 NA non-coding upstream 196229 48720716 ~ 48721029 (+)
G2089260 NA non-coding upstream 196945 48719919 ~ 48720313 (+)
G2089902 NA non-coding downstream 5042 48923123 ~ 48923343 (+)
G2089903 NA non-coding downstream 5500 48923581 ~ 48923815 (+)
G2089904 NA non-coding downstream 5781 48923862 ~ 48924312 (+)
G2089922 NA non-coding downstream 109007 49027088 ~ 49027310 (+)
G2089927 NA non-coding downstream 127068 49045149 ~ 49045375 (+)
G2089124 NA other upstream 461772 48432478 ~ 48455486 (+)
G2089020 NA other upstream 725896 48188209 ~ 48191362 (+)
G2088870 NA other upstream 1052429 47854106 ~ 47864829 (+)
G2088732 NA other upstream 1379313 47532422 ~ 47537945 (+)
G2088729 NA other upstream 1388710 47525440 ~ 47528548 (+)
G2089906 NA other downstream 8894 48926975 ~ 48927292 (+)
G2089935 NA other downstream 139924 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 394662 49312743 ~ 49316226 (+)
G2090103 NA other downstream 415366 49333447 ~ 49334183 (+)

Expression


Co-expression Network