G2089904


Basic Information

Item Value
gene id G2089904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48923862 ~ 48924312 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390617
TTACAATGTTCTGCAGCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCGATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACTCAGTCTTCATCATGAAGTCATTGTGTTCTACTCTATTACATACAAGAAAACACCTCGGAATGACACATTTACTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390617 True 451 lncRNA 0.35 1 48923862 48924312

Neighbor

gene id symbol gene type direction distance location
zmp:0000001236 LOC106581583 coding upstream 149181 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 299414 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 465423 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 604777 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 1440828 47482390 ~ 47483034 (+)
trpc6b LOC106581586 coding downstream 165571 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 277136 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 398701 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1541571 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1741407 50665719 ~ 50850459 (+)
G2089903 NA non-coding upstream 47 48923581 ~ 48923815 (+)
G2089902 NA non-coding upstream 519 48923123 ~ 48923343 (+)
G2089900 NA non-coding upstream 5781 48917258 ~ 48918081 (+)
G2089213 NA non-coding upstream 152688 48770427 ~ 48771174 (+)
G2089922 NA non-coding downstream 102776 49027088 ~ 49027310 (+)
G2089927 NA non-coding downstream 120837 49045149 ~ 49045375 (+)
G2089930 NA non-coding downstream 127453 49051765 ~ 49052047 (+)
G2089931 NA non-coding downstream 127834 49052146 ~ 49052369 (+)
G2089937 NA non-coding downstream 139778 49064090 ~ 49064458 (+)
G2089124 NA other upstream 468376 48432478 ~ 48455486 (+)
G2089020 NA other upstream 732500 48188209 ~ 48191362 (+)
G2088870 NA other upstream 1059033 47854106 ~ 47864829 (+)
G2088732 NA other upstream 1385917 47532422 ~ 47537945 (+)
G2088729 NA other upstream 1395314 47525440 ~ 47528548 (+)
G2089906 NA other downstream 2663 48926975 ~ 48927292 (+)
G2089935 NA other downstream 133693 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 388431 49312743 ~ 49316226 (+)
G2090103 NA other downstream 409135 49333447 ~ 49334183 (+)

Expression


Co-expression Network