Gene
RNA
| Item | Value |
|---|---|
| gene id | G2089922 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 49027088 ~ 49027310 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2390635 | True | 223 | lncRNA | 0.34 | 1 | 49027088 | 49027310 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zmp:0000001236 | LOC106581583 | coding | upstream | 252407 | 48633372 ~ 48774681 (+) |
| gab2 | gab2 | coding | upstream | 402640 | 48460449 ~ 48624448 (+) |
| nars2 | nars2 | coding | upstream | 568649 | 48401253 ~ 48458439 (+) |
| tenm4 | tenm4 | coding | upstream | 708003 | 47640597 ~ 48319085 (+) |
| LOC118944690 | NA | coding | upstream | 1544054 | 47482390 ~ 47483034 (+) |
| trpc6b | LOC106581586 | coding | downstream | 62573 | 49089883 ~ 49186113 (+) |
| pgr | LOC100846969 | coding | downstream | 174138 | 49201448 ~ 49266635 (+) |
| LOC118944717 | NA | coding | downstream | 295703 | 49323013 ~ 49323866 (+) |
| LOC110508133 | fbxo40 | coding | downstream | 1438573 | 50465883 ~ 50476608 (+) |
| LOC110507254 | nectin1 | coding | downstream | 1638409 | 50665719 ~ 50850459 (+) |
| G2089904 | NA | non-coding | upstream | 102776 | 48923862 ~ 48924312 (+) |
| G2089903 | NA | non-coding | upstream | 103273 | 48923581 ~ 48923815 (+) |
| G2089902 | NA | non-coding | upstream | 103745 | 48923123 ~ 48923343 (+) |
| G2089900 | NA | non-coding | upstream | 109007 | 48917258 ~ 48918081 (+) |
| G2089927 | NA | non-coding | downstream | 17839 | 49045149 ~ 49045375 (+) |
| G2089930 | NA | non-coding | downstream | 24455 | 49051765 ~ 49052047 (+) |
| G2089931 | NA | non-coding | downstream | 24836 | 49052146 ~ 49052369 (+) |
| G2089937 | NA | non-coding | downstream | 36780 | 49064090 ~ 49064458 (+) |
| G2089983 | NA | non-coding | downstream | 51143 | 49078453 ~ 49078657 (+) |
| G2089906 | NA | other | upstream | 99796 | 48926975 ~ 48927292 (+) |
| G2089124 | NA | other | upstream | 571602 | 48432478 ~ 48455486 (+) |
| G2089020 | NA | other | upstream | 835726 | 48188209 ~ 48191362 (+) |
| G2088870 | NA | other | upstream | 1162259 | 47854106 ~ 47864829 (+) |
| G2088732 | NA | other | upstream | 1489143 | 47532422 ~ 47537945 (+) |
| G2089935 | NA | other | downstream | 30695 | 49058005 ~ 49058895 (+) |
| G2090091 | LOC106581584 | other | downstream | 285433 | 49312743 ~ 49316226 (+) |
| G2090103 | NA | other | downstream | 306137 | 49333447 ~ 49334183 (+) |
| G2090508 | NA | other | downstream | 757817 | 49782101 ~ 49788805 (+) |
