G2089927


Basic Information

Item Value
gene id G2089927
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49045149 ~ 49045375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390640
gctgtcttggtaggaactaatggggatccataataaaccccaagaagagtagctgctgtcttggtaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggtaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggtaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390640 True 227 lncRNA 0.47 1 49045149 49045375

Neighbor

gene id symbol gene type direction distance location
zmp:0000001236 LOC106581583 coding upstream 270468 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 420701 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 586710 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 726064 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 1562115 47482390 ~ 47483034 (+)
trpc6b LOC106581586 coding downstream 44508 49089883 ~ 49186113 (+)
pgr LOC100846969 coding downstream 156073 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 277638 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1420508 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1620344 50665719 ~ 50850459 (+)
G2089922 NA non-coding upstream 17839 49027088 ~ 49027310 (+)
G2089904 NA non-coding upstream 120837 48923862 ~ 48924312 (+)
G2089903 NA non-coding upstream 121334 48923581 ~ 48923815 (+)
G2089902 NA non-coding upstream 121806 48923123 ~ 48923343 (+)
G2089900 NA non-coding upstream 127068 48917258 ~ 48918081 (+)
G2089930 NA non-coding downstream 6390 49051765 ~ 49052047 (+)
G2089931 NA non-coding downstream 6771 49052146 ~ 49052369 (+)
G2089937 NA non-coding downstream 18715 49064090 ~ 49064458 (+)
G2089983 NA non-coding downstream 33078 49078453 ~ 49078657 (+)
G2090001 NA non-coding downstream 53929 49099304 ~ 49099878 (+)
G2089906 NA other upstream 117857 48926975 ~ 48927292 (+)
G2089124 NA other upstream 589663 48432478 ~ 48455486 (+)
G2089020 NA other upstream 853787 48188209 ~ 48191362 (+)
G2088870 NA other upstream 1180320 47854106 ~ 47864829 (+)
G2088732 NA other upstream 1507204 47532422 ~ 47537945 (+)
G2089935 NA other downstream 12630 49058005 ~ 49058895 (+)
G2090091 LOC106581584 other downstream 267368 49312743 ~ 49316226 (+)
G2090103 NA other downstream 288072 49333447 ~ 49334183 (+)
G2090508 NA other downstream 739752 49782101 ~ 49788805 (+)

Expression


Co-expression Network